More than 300 homologs were found in PanDaTox collection
for query gene Mnod_1110 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  100 
 
 		 245 aa  479  1e-134  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  89.39 
 
 		 244 aa  393  1e-108  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  61.71 
 
 		 228 aa  246  2e-64  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  58.64 
 
 		 230 aa  235  6e-61  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  58.04 
 
 		 223 aa  229  3e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4801  two component LuxR family transcriptional regulator  57.08 
 
 		 223 aa  219  3.9999999999999997e-56  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.136897 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  40.55 
 
 		 224 aa  127  2.0000000000000002e-28  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_4981  two component LuxR family transcriptional regulator  37.27 
 
 		 244 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  34.58 
 
 		 224 aa  119  3.9999999999999996e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  35.81 
 
 		 241 aa  119  4.9999999999999996e-26  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  36.45 
 
 		 221 aa  118  9.999999999999999e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  36.67 
 
 		 222 aa  117  1.9999999999999998e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  35.27 
 
 		 221 aa  117  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  35.51 
 
 		 221 aa  116  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  34.26 
 
 		 213 aa  116  3e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  35.05 
 
 		 251 aa  116  3.9999999999999997e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  35.05 
 
 		 251 aa  116  3.9999999999999997e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  35.98 
 
 		 221 aa  115  5e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  35.05 
 
 		 219 aa  115  6e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  35.35 
 
 		 210 aa  115  6.9999999999999995e-25  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  36 
 
 		 224 aa  115  7.999999999999999e-25  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  37.2 
 
 		 221 aa  115  8.999999999999998e-25  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  36.74 
 
 		 221 aa  114  1.0000000000000001e-24  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  33.64 
 
 		 220 aa  114  1.0000000000000001e-24  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  32.54 
 
 		 218 aa  114  1.0000000000000001e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  39.46 
 
 		 227 aa  113  2.0000000000000002e-24  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  32.71 
 
 		 220 aa  113  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  36.71 
 
 		 221 aa  113  3e-24  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  35.65 
 
 		 226 aa  113  3e-24  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  33.94 
 
 		 219 aa  113  3e-24  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  36.71 
 
 		 221 aa  113  3e-24  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  31.63 
 
 		 223 aa  112  4.0000000000000004e-24  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  33.01 
 
 		 238 aa  112  4.0000000000000004e-24  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  32.24 
 
 		 220 aa  112  5e-24  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  32.24 
 
 		 220 aa  112  5e-24  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  34.11 
 
 		 222 aa  112  5e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  34.86 
 
 		 212 aa  111  9e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  32.24 
 
 		 211 aa  111  9e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  34.12 
 
 		 229 aa  111  9e-24  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  33.01 
 
 		 220 aa  111  1.0000000000000001e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  32.71 
 
 		 219 aa  111  1.0000000000000001e-23  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  32.54 
 
 		 220 aa  111  1.0000000000000001e-23  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  31.16 
 
 		 223 aa  111  1.0000000000000001e-23  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  31.78 
 
 		 220 aa  110  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  36.32 
 
 		 215 aa  111  1.0000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  31.16 
 
 		 223 aa  111  1.0000000000000001e-23  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  33.49 
 
 		 221 aa  111  1.0000000000000001e-23  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  34.29 
 
 		 209 aa  110  2.0000000000000002e-23  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  30.7 
 
 		 223 aa  110  2.0000000000000002e-23  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  32.54 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  32.06 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  35.75 
 
 		 221 aa  110  2.0000000000000002e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  32.06 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  35.51 
 
 		 224 aa  110  3e-23  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  36.67 
 
 		 218 aa  109  3e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  30.37 
 
 		 227 aa  110  3e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  31.82 
 
 		 252 aa  109  3e-23  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  36.06 
 
 		 210 aa  109  4.0000000000000004e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  34.58 
 
 		 223 aa  109  5e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  35.71 
 
 		 224 aa  109  5e-23  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  35.05 
 
 		 224 aa  108  6e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  34.58 
 
 		 225 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007492  Pfl01_3254  two component LuxR family transcriptional regulator  34.93 
 
 		 201 aa  108  1e-22  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.49762 
 
 
-
 
NC_009719  Plav_3606  two component LuxR family transcriptional regulator  37.79 
 
 		 208 aa  107  1e-22  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  34.29 
 
 		 230 aa  108  1e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  33.01 
 
 		 219 aa  107  1e-22  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  34.4 
 
 		 224 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  33.01 
 
 		 219 aa  107  2e-22  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  36.23 
 
 		 221 aa  107  2e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  33.95 
 
 		 216 aa  106  3e-22  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  34.26 
 
 		 215 aa  106  3e-22  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  38.03 
 
 		 209 aa  105  5e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  36.02 
 
 		 209 aa  105  6e-22  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  34.93 
 
 		 217 aa  105  7e-22  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_3347  two component LuxR family transcriptional regulator  36.63 
 
 		 234 aa  105  7e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.563314  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  35.14 
 
 		 227 aa  105  8e-22  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  31.31 
 
 		 220 aa  105  8e-22  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  34.42 
 
 		 215 aa  105  8e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  34.1 
 
 		 212 aa  105  8e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  37.74 
 
 		 211 aa  105  8e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  0.0337978 
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  36.15 
 
 		 206 aa  105  8e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  32.62 
 
 		 231 aa  104  1e-21  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  34.58 
 
 		 217 aa  104  1e-21  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  36.15 
 
 		 207 aa  103  2e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  33.95 
 
 		 215 aa  104  2e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  34.11 
 
 		 214 aa  103  2e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  33.93 
 
 		 231 aa  103  3e-21  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  33.65 
 
 		 210 aa  102  4e-21  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  37.5 
 
 		 248 aa  102  4e-21  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  34.11 
 
 		 214 aa  102  4e-21  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  34.11 
 
 		 214 aa  102  4e-21  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  34.29 
 
 		 220 aa  102  5e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  36.71 
 
 		 244 aa  102  5e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  36.71 
 
 		 244 aa  102  5e-21  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.89842 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  33.02 
 
 		 216 aa  102  7e-21  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  33.02 
 
 		 216 aa  102  7e-21  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  34.58 
 
 		 215 aa  102  7e-21  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  33.95 
 
 		 216 aa  102  7e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  31.78 
 
 		 219 aa  102  7e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  35.24 
 
 		 214 aa  101  9e-21  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>