More than 300 homologs were found in PanDaTox collection
for query gene RSP_4131 on replicon NC_007489
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  100 
 
 		 220 aa  446  1.0000000000000001e-124  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  40 
 
 		 214 aa  151  8.999999999999999e-36  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1676  two component LuxR family transcriptional regulator  40.1 
 
 		 210 aa  136  2e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.123322  normal  1 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  35.35 
 
 		 204 aa  137  2e-31  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_007493  RSP_0087  two component transcriptional regulator, LuxR  39.61 
 
 		 210 aa  135  5e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.197031  n/a   
 
 
-
 
NC_009049  Rsph17029_1723  two component LuxR family transcriptional regulator  39.61 
 
 		 240 aa  135  7.000000000000001e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  36.06 
 
 		 207 aa  124  2e-27  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  34.83 
 
 		 201 aa  120  1.9999999999999998e-26  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  33.33 
 
 		 204 aa  119  3e-26  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  32.42 
 
 		 220 aa  111  7.000000000000001e-24  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  33.01 
 
 		 209 aa  111  8.000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  32.41 
 
 		 224 aa  109  4.0000000000000004e-23  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  33.5 
 
 		 213 aa  108  6e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  29.81 
 
 		 238 aa  108  8.000000000000001e-23  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  33.33 
 
 		 219 aa  107  1e-22  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  30.77 
 
 		 219 aa  107  2e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  30.95 
 
 		 219 aa  106  3e-22  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  32.35 
 
 		 220 aa  105  6e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  32.84 
 
 		 215 aa  105  8e-22  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  33.01 
 
 		 211 aa  104  1e-21  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  32.71 
 
 		 212 aa  103  2e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  29.86 
 
 		 222 aa  102  3e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  32.2 
 
 		 209 aa  102  3e-21  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  32.04 
 
 		 252 aa  102  4e-21  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  34.16 
 
 		 213 aa  102  4e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal  1 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  31.43 
 
 		 219 aa  102  4e-21  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  33.17 
 
 		 209 aa  102  5e-21  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  31.46 
 
 		 216 aa  100  1e-20  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  32.67 
 
 		 209 aa  101  1e-20  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  32.67 
 
 		 221 aa  100  1e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  28.51 
 
 		 227 aa  100  1e-20  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  32.38 
 
 		 221 aa  101  1e-20  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  29.44 
 
 		 220 aa  100  1e-20  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  29.44 
 
 		 220 aa  100  2e-20  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  30 
 
 		 220 aa  100  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  29.63 
 
 		 220 aa  100  2e-20  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  29.61 
 
 		 220 aa  100  2e-20  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  29.61 
 
 		 220 aa  100  2e-20  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  31.07 
 
 		 209 aa  100  2e-20  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  29.44 
 
 		 220 aa  100  2e-20  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  33.5 
 
 		 212 aa  99.8  3e-20  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  29.61 
 
 		 220 aa  100  3e-20  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  31.43 
 
 		 227 aa  99.4  4e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  32.18 
 
 		 218 aa  99.4  4e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  27.75 
 
 		 216 aa  99.4  4e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  28.3 
 
 		 220 aa  98.6  7e-20  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  29.33 
 
 		 219 aa  98.2  8e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  33.17 
 
 		 209 aa  97.4  1e-19  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  33.33 
 
 		 213 aa  97.1  2e-19  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  34.83 
 
 		 223 aa  97.1  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  33.99 
 
 		 245 aa  97.1  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  33.5 
 
 		 219 aa  97.4  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  31.78 
 
 		 218 aa  96.7  3e-19  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  34.98 
 
 		 209 aa  96.3  3e-19  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  31.78 
 
 		 218 aa  96.7  3e-19  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  29.19 
 
 		 224 aa  95.9  4e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  30.1 
 
 		 215 aa  95.9  4e-19  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  31.68 
 
 		 222 aa  95.5  5e-19  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  30.62 
 
 		 206 aa  95.5  5e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  32.02 
 
 		 216 aa  95.5  5e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  32.66 
 
 		 209 aa  95.5  6e-19  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  32.66 
 
 		 209 aa  95.5  6e-19  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  33.66 
 
 		 244 aa  95.1  7e-19  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  34.18 
 
 		 217 aa  95.1  7e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  34.12 
 
 		 221 aa  95.1  8e-19  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  33.33 
 
 		 207 aa  95.1  8e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  32.86 
 
 		 221 aa  94.7  9e-19  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  33.65 
 
 		 221 aa  94.4  1e-18  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  33.5 
 
 		 211 aa  94  1e-18  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  28.05 
 
 		 224 aa  94  2e-18  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  29.61 
 
 		 210 aa  93.6  2e-18  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal  1 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  30.88 
 
 		 216 aa  93.6  2e-18  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  30.39 
 
 		 217 aa  94  2e-18  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  29.95 
 
 		 224 aa  93.6  2e-18  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  30.5 
 
 		 231 aa  93.6  2e-18  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  30.39 
 
 		 217 aa  94  2e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  28.86 
 
 		 209 aa  93.2  3e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  31.5 
 
 		 203 aa  92.8  3e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  33.18 
 
 		 221 aa  92.8  3e-18  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  29.67 
 
 		 229 aa  92.8  3e-18  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  28.23 
 
 		 218 aa  92.8  4e-18  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_2780  two component LuxR family transcriptional regulator  31 
 
 		 226 aa  92.8  4e-18  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  32.68 
 
 		 218 aa  92.4  4e-18  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  29.06 
 
 		 236 aa  92.8  4e-18  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  31.34 
 
 		 231 aa  92.4  5e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  33.01 
 
 		 219 aa  92.4  5e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  32.37 
 
 		 227 aa  92.4  5e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  27.14 
 
 		 223 aa  91.7  7e-18  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  27.14 
 
 		 223 aa  91.7  7e-18  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  27.14 
 
 		 223 aa  91.7  8e-18  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  32.39 
 
 		 225 aa  91.7  8e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  31.65 
 
 		 222 aa  91.3  9e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_0970  two component LuxR family transcriptional regulator  33.5 
 
 		 209 aa  91.3  1e-17  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0307407  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  30.95 
 
 		 217 aa  90.9  1e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  30.39 
 
 		 216 aa  90.9  1e-17  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  30.69 
 
 		 226 aa  91.3  1e-17  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  30.43 
 
 		 224 aa  90.9  1e-17  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  30.92 
 
 		 224 aa  91.3  1e-17  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  33.17 
 
 		 221 aa  91.3  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  27.14 
 
 		 223 aa  90.9  1e-17  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
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