| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_2305 |
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| Symbol | |
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| ID | 4279217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2749990 |
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| End bp | 2750652 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638135102 |
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| Product | two component transcriptional regulator, LuxR family protein |
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| Protein accession | YP_750989 |
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| Protein GI | 114563476 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCTCG AAAATTTAAA CATCATCATC GCAGATGATC ACCCATTATT CCGTAACGCC
TTAAGGCTAG CGTTGAGTAA TGCATTTGAA AAAACGCAAT GGTTTGAGGC CGATAGTGCC
GAAGCATTGC AAGGGGTTCT TGATCAAAAA GAGACCCCAT TTGACTTAAT CCTGCTAGAC
CTACAAATGC CAGGATCACA CGGTTACTCA ACCCTGATCC ACCTCAGAAC TCATTATCCA
GATATCCCCG TTGTGGTGAT ATCTGCCCAT GAAGACATCA ATACAATTAG CCGAGCAATA
CATTATGGCA GTAGCGGATT CATCCCTAAA TCTGCGTCAA TGGAAGTGTT GGCCGAAGCA
TTAAATGCGG TGTTATACGG TGATATTTGG TTACCAAAAG GCACACAAAT CGTGCCGGTT
TCTGACGACC CGACCGACAA AATGGCCAAC CGATTATCAG ATTTAACCCC GCAACAATAT
CGCGTGTTAC AGATGTTTGC AGAAGGGTTA CTCAACAAAC AAATTGCTTA TGATTTTGGG
GTATCAGAAG CAACTATCAA AGCACATGCC ACAGCGATAT TTCGTAAACT GGGTGTTCGC
AATCGCACTC AAGCGGTGAT AGCATTGCAA CAATTAGAAA TGGATAGAAT TGATATCTCG
TAA
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| Protein sequence | MKLENLNIII ADDHPLFRNA LRLALSNAFE KTQWFEADSA EALQGVLDQK ETPFDLILLD
LQMPGSHGYS TLIHLRTHYP DIPVVVISAH EDINTISRAI HYGSSGFIPK SASMEVLAEA
LNAVLYGDIW LPKGTQIVPV SDDPTDKMAN RLSDLTPQQY RVLQMFAEGL LNKQIAYDFG
VSEATIKAHA TAIFRKLGVR NRTQAVIALQ QLEMDRIDIS
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