| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal195_2606 |
|---|
| Symbol | |
|---|
| ID | 5754365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009997 |
|---|
| Strand | + |
|---|
| Start bp | 3085958 |
|---|
| End bp | 3086620 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641288900 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001555034 |
|---|
| Protein GI | 160875718 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00642184 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00275886 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTAG AAAACTTAAA TATTATTATC GCAGACGATC ATCCATTGTT CAGAAATGCA
CTACGTCAAG CACTGACCAC AGCGTTTGAG CATGCACAAT GGTTTGAAGC CGACAGTGCT
GAAGCACTGC AATCTGTGTT GGATGTCCGT AGCATCGATT ACGATCTTGT ACTGTTAGAT
TTGCAGATGC CCGGTTCCCA CGGCTACTCC ACACTTATTC ACCTACGCTC ACATTATCCC
GATTTACCCG TGGTAGTGAT TTCTGCACAC GAGGATATCA ATACCATTAG CCGTGCGATT
CATTATGGTA GCAGTGGTTT TATTCCTAAA TCGGCCTCGA TGGAAACCCT CAAAGAGGCA
CTGAGTGCGG TGTTATTCGG TGATATTTGG TTGCCTAAAG GCACTGAGAT TATTTCTATC
GATGACGACG CCGTTGATAA AATGGCCAGC AAATTATCCG ATCTCACGCC GCAGCAATAT
AAAGTGTTGC AGATGTTTGC CGAAGGTTTG TTAAATAAGC AAATTGCCTA CGATCTTGGC
GTGTCTGAAG CGACCATAAA AGCGCACGCG ACTGCCATTT TTAGAAAACT GGGCGTTCGT
AACCGTACAC AAGCCGTCAT AGCACTCGCT CAGCTTGAGA TGGATAAAGT CGATTTATCT
TAA
|
|---|
| Protein sequence | MKLENLNIII ADDHPLFRNA LRQALTTAFE HAQWFEADSA EALQSVLDVR SIDYDLVLLD
LQMPGSHGYS TLIHLRSHYP DLPVVVISAH EDINTISRAI HYGSSGFIPK SASMETLKEA
LSAVLFGDIW LPKGTEIISI DDDAVDKMAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVIALA QLEMDKVDLS
|
|---|
| |