| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1732 |
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| Symbol | |
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| ID | 4479565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 2040660 |
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| End bp | 2041322 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639726315 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_869371 |
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| Protein GI | 117920179 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0049943 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.183248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCTAG AAAACTTAAA TATAATTATT GCCGATGACC ATCCATTGTT TCGAAATGCA
CTACGTCAAG CCCTCAGTAG CGCCTTTGAG CACACTCAAT GGTATGAGGC CGACAGTGCC
GATGCATTGC AGTCAGTGTT AGATTCACAA ACTGTGAATT ACGATTTGGT TTTGCTGGAT
CTGCAAATGC CTGGCTCCCA TGGCTATTCG ACGCTTATCC ACCTGCGCTC CCACTACCCT
GAACTGCCAG TGGTGGTGAT TTCGGCCCAT GAGGATATCA ATACTATTAG CCGTGCTATC
CATTATGGCG GCAGTGGTTT TATTCCTAAA TCGGCCTCGA TGGAAACCTT AAAAGAAGCG
CTCACCGCCG TATTATTTGG GGATATCTGG TTACCTGCTG GCGCCGAAAT CATCCCGATT
GAAGATGATG ATACGGATAA GATGGCGAAT AAACTTTCCG ATCTGACGCC GCAGCAATAT
AAAGTACTGC AGATGTTCGC CGAGGGCTTA CTCAATAAGC AAATCGCCTA TGACTTAGGT
GTGTCTGAAG CCACCATCAA AGCCCACGCT ACCGCGATTT TTAGAAAGCT GGGTGTGCGT
AATCGTACTC AAGCCGTTAT TGCCTTAGGC CAGCTTGAAA TGGATAAAGT GGATTTGACC
TAA
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| Protein sequence | MKLENLNIII ADDHPLFRNA LRQALSSAFE HTQWYEADSA DALQSVLDSQ TVNYDLVLLD
LQMPGSHGYS TLIHLRSHYP ELPVVVISAH EDINTISRAI HYGGSGFIPK SASMETLKEA
LTAVLFGDIW LPAGAEIIPI EDDDTDKMAN KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG
VSEATIKAHA TAIFRKLGVR NRTQAVIALG QLEMDKVDLT
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