More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1676 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1676  two component LuxR family transcriptional regulator  100 
 
 
210 aa  428  1e-119  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.123322  normal 
 
 
-
 
NC_007493  RSP_0087  two component transcriptional regulator, LuxR  97.62 
 
 
210 aa  419  1e-116  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.197031  n/a   
 
 
-
 
NC_009049  Rsph17029_1723  two component LuxR family transcriptional regulator  97.62 
 
 
240 aa  419  1e-116  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  45.37 
 
 
214 aa  184  1.0000000000000001e-45  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  42.16 
 
 
204 aa  165  4e-40  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  44.44 
 
 
207 aa  154  8e-37  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  39.32 
 
 
204 aa  147  1.0000000000000001e-34  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  40.1 
 
 
220 aa  136  2e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009430  Rsph17025_4179  hypothetical protein  40 
 
 
232 aa  126  2.0000000000000002e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.365276 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  38.86 
 
 
209 aa  125  4.0000000000000003e-28  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  35.15 
 
 
218 aa  123  2e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  35.29 
 
 
201 aa  119  4.9999999999999996e-26  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  39.44 
 
 
212 aa  117  9.999999999999999e-26  Opitutus terrae PB90-1  Bacteria  normal  normal  0.383896 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  36.76 
 
 
209 aa  117  1.9999999999999998e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  38.5 
 
 
212 aa  116  1.9999999999999998e-25  Caulobacter sp. K31  Bacteria  normal  normal  0.881689 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  38.16 
 
 
235 aa  115  6e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  35 
 
 
211 aa  113  3e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  31.28 
 
 
219 aa  112  4.0000000000000004e-24  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_013595  Sros_3244  response regulator receiver protein  39.72 
 
 
218 aa  112  4.0000000000000004e-24  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.000568428  normal  0.332742 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  34.08 
 
 
224 aa  112  5e-24  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  36.14 
 
 
213 aa  111  8.000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  33.04 
 
 
223 aa  111  9e-24  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  31.37 
 
 
213 aa  110  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  36.23 
 
 
212 aa  110  2.0000000000000002e-23  Opitutus terrae PB90-1  Bacteria  normal  normal  0.996792 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  35.32 
 
 
218 aa  109  3e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  36.76 
 
 
213 aa  109  3e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  33.33 
 
 
209 aa  109  3e-23  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  38.14 
 
 
225 aa  108  5e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_007489  RSP_4133  two component LuxR family transcriptional regulator  34.41 
 
 
240 aa  108  7.000000000000001e-23  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.58 
 
 
216 aa  108  7.000000000000001e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  33.33 
 
 
210 aa  107  1e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  32.54 
 
 
211 aa  107  1e-22  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  31.55 
 
 
236 aa  107  1e-22  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  33.17 
 
 
218 aa  107  1e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  32.06 
 
 
212 aa  106  2e-22  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  31.31 
 
 
229 aa  106  2e-22  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  33.01 
 
 
211 aa  107  2e-22  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  36.1 
 
 
216 aa  106  2e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  37.61 
 
 
224 aa  106  3e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  33.98 
 
 
218 aa  106  3e-22  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  34.98 
 
 
209 aa  106  3e-22  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  37.5 
 
 
209 aa  106  3e-22  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  37.5 
 
 
219 aa  106  3e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  34.91 
 
 
221 aa  106  3e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  36.11 
 
 
215 aa  106  3e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  37.98 
 
 
213 aa  105  4e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  36.27 
 
 
197 aa  105  5e-22  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  31.55 
 
 
220 aa  105  7e-22  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  36.28 
 
 
215 aa  104  8e-22  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_2422  two component LuxR family transcriptional regulator  34.63 
 
 
196 aa  104  8e-22  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0496562  normal  0.787858 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  35.16 
 
 
225 aa  103  1e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  34.15 
 
 
215 aa  103  1e-21  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  30.69 
 
 
224 aa  103  2e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  36.95 
 
 
226 aa  103  2e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
NC_007794  Saro_1236  two component LuxR family transcriptional regulator  33.82 
 
 
208 aa  103  2e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.23752  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  38.16 
 
 
201 aa  103  2e-21  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  31.9 
 
 
221 aa  103  2e-21  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  30.81 
 
 
221 aa  103  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  34.91 
 
 
221 aa  103  2e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  33.65 
 
 
209 aa  102  3e-21  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  35.81 
 
 
215 aa  103  3e-21  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35 
 
 
226 aa  102  3e-21  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009049  Rsph17029_1528  two component LuxR family transcriptional regulator  36.95 
 
 
226 aa  102  3e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0620794 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  36.07 
 
 
230 aa  102  4e-21  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  34.63 
 
 
207 aa  102  4e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  30.23 
 
 
221 aa  102  5e-21  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  34.27 
 
 
232 aa  102  5e-21  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  33.5 
 
 
214 aa  102  5e-21  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  33.5 
 
 
214 aa  102  5e-21  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_1249  two component LuxR family transcriptional regulator  32.69 
 
 
235 aa  102  5e-21  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  33.96 
 
 
221 aa  102  6e-21  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  35.35 
 
 
215 aa  101  8e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  37.04 
 
 
226 aa  101  9e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007493  RSP_0511  two component LuxR family transcriptional regulator  34.48 
 
 
191 aa  101  9e-21  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  35.55 
 
 
214 aa  101  9e-21  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1932  two component LuxR family transcriptional regulator  32.85 
 
 
236 aa  101  9e-21  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  35.15 
 
 
209 aa  100  1e-20  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  35.35 
 
 
215 aa  101  1e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  30.48 
 
 
219 aa  100  1e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  35.81 
 
 
215 aa  101  1e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  35.81 
 
 
215 aa  101  1e-20  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  35.81 
 
 
215 aa  101  1e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  35.81 
 
 
215 aa  101  1e-20  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  33.49 
 
 
215 aa  101  1e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2591  two component LuxR family transcriptional regulator  32.69 
 
 
235 aa  100  1e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211381  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  35.81 
 
 
215 aa  101  1e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2443  two component LuxR family transcriptional regulator  33.33 
 
 
215 aa  101  1e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  34.8 
 
 
209 aa  101  1e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  35.29 
 
 
208 aa  100  1e-20  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  33.62 
 
 
231 aa  101  1e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_007498  Pcar_1400  two component signal transduction response regulator  33.02 
 
 
214 aa  100  2e-20  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  33.18 
 
 
215 aa  100  2e-20  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  37.02 
 
 
209 aa  100  2e-20  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  30.33 
 
 
238 aa  100  2e-20  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2163  two component LuxR family transcriptional regulator  34.48 
 
 
191 aa  100  2e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.394692  normal  0.0704049 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  34.88 
 
 
215 aa  99.8  2e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  32.02 
 
 
209 aa  99.8  3e-20  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  32.5 
 
 
217 aa  99.4  3e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  30.14 
 
 
220 aa  99.8  3e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  32.7 
 
 
224 aa  99.8  3e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal 
 
 
-
 
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