More than 300 homologs were found in PanDaTox collection
for query gene Mnod_3782 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  100 
 
 		 223 aa  443  1e-123  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  57.34 
 
 		 228 aa  226  2e-58  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  58.45 
 
 		 244 aa  224  7e-58  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  58.04 
 
 		 245 aa  223  3e-57  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  53.6 
 
 		 230 aa  221  4.9999999999999996e-57  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_010505  Mrad2831_4801  two component LuxR family transcriptional regulator  50.46 
 
 		 223 aa  195  4.0000000000000005e-49  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.136897 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  38.25 
 
 		 224 aa  122  3e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  34.58 
 
 		 213 aa  122  6e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  35.02 
 
 		 219 aa  122  6e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  33.65 
 
 		 220 aa  117  9.999999999999999e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  34.6 
 
 		 211 aa  114  8.999999999999998e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  34.11 
 
 		 215 aa  114  1.0000000000000001e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  34.11 
 
 		 215 aa  114  1.0000000000000001e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  34.74 
 
 		 221 aa  114  2.0000000000000002e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_4981  two component LuxR family transcriptional regulator  34.91 
 
 		 244 aa  112  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  33.18 
 
 		 221 aa  112  5e-24  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  35.38 
 
 		 221 aa  112  6e-24  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  36.02 
 
 		 231 aa  112  6e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  36.32 
 
 		 251 aa  111  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  36.02 
 
 		 221 aa  111  1.0000000000000001e-23  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  36.45 
 
 		 219 aa  110  1.0000000000000001e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  35.82 
 
 		 251 aa  110  1.0000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010511  M446_3347  two component LuxR family transcriptional regulator  32.56 
 
 		 234 aa  111  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.563314  normal  1 
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  35.24 
 
 		 216 aa  110  1.0000000000000001e-23  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  36.79 
 
 		 212 aa  110  1.0000000000000001e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  34.78 
 
 		 209 aa  111  1.0000000000000001e-23  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  38.39 
 
 		 217 aa  110  2.0000000000000002e-23  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_3254  two component LuxR family transcriptional regulator  36.32 
 
 		 201 aa  110  2.0000000000000002e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.49762 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  33.93 
 
 		 238 aa  110  2.0000000000000002e-23  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  36.53 
 
 		 215 aa  109  3e-23  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  35.91 
 
 		 221 aa  109  4.0000000000000004e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  35.68 
 
 		 227 aa  109  4.0000000000000004e-23  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_008463  PA14_46360  putative two-component response regulator  38.14 
 
 		 210 aa  108  7.000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.016821 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  32.23 
 
 		 252 aa  107  2e-22  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  33.33 
 
 		 224 aa  107  2e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  32.56 
 
 		 224 aa  107  2e-22  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  35.65 
 
 		 217 aa  106  2e-22  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  32.74 
 
 		 220 aa  106  2e-22  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  36.97 
 
 		 215 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  33.49 
 
 		 216 aa  106  3e-22  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  33.49 
 
 		 216 aa  106  3e-22  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  37.32 
 
 		 225 aa  106  3e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  34.98 
 
 		 219 aa  106  3e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  38.35 
 
 		 224 aa  106  3e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  36.36 
 
 		 217 aa  105  4e-22  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  30.81 
 
 		 223 aa  105  4e-22  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  30.81 
 
 		 223 aa  105  4e-22  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  36.36 
 
 		 217 aa  105  4e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  32.89 
 
 		 220 aa  105  4e-22  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  32.74 
 
 		 220 aa  105  5e-22  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009425  Ent638_4204  two component LuxR family transcriptional regulator  33.33 
 
 		 202 aa  105  5e-22  Enterobacter sp. 638  Bacteria  hitchhiker  0.00789571  normal  1 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  32.74 
 
 		 220 aa  105  5e-22  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  31.28 
 
 		 227 aa  105  5e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  33.8 
 
 		 216 aa  105  6e-22  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  36.67 
 
 		 209 aa  105  7e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  33.33 
 
 		 221 aa  105  8e-22  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  35.81 
 
 		 214 aa  104  1e-21  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  33.33 
 
 		 221 aa  104  1e-21  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  30.33 
 
 		 223 aa  104  1e-21  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  31.28 
 
 		 219 aa  103  2e-21  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  36.64 
 
 		 248 aa  103  2e-21  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  32.84 
 
 		 221 aa  103  2e-21  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  33.82 
 
 		 216 aa  103  3e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  33.8 
 
 		 210 aa  102  3e-21  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  36.54 
 
 		 219 aa  102  3e-21  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  35.1 
 
 		 213 aa  102  5e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  34.62 
 
 		 215 aa  102  5e-21  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  34.58 
 
 		 219 aa  101  7e-21  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  33.48 
 
 		 220 aa  101  7e-21  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  30.19 
 
 		 223 aa  102  7e-21  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  33.48 
 
 		 220 aa  101  1e-20  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  32.87 
 
 		 219 aa  100  2e-20  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  32.89 
 
 		 220 aa  100  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  32.24 
 
 		 210 aa  100  2e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  33.18 
 
 		 223 aa  100  2e-20  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  32.86 
 
 		 223 aa  100  2e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  31.72 
 
 		 220 aa  100  2e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  33.33 
 
 		 221 aa  100  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  32.74 
 
 		 220 aa  100  2e-20  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  34.7 
 
 		 221 aa  100  2e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  34.98 
 
 		 241 aa  99.8  3e-20  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  31.75 
 
 		 224 aa  99.8  3e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  31.3 
 
 		 243 aa  100  3e-20  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  36.79 
 
 		 216 aa  100  3e-20  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  32.43 
 
 		 219 aa  99.4  4e-20  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  35.1 
 
 		 218 aa  99  5e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  30.48 
 
 		 221 aa  99  5e-20  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  30.48 
 
 		 221 aa  99  5e-20  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.682063 
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  35.27 
 
 		 214 aa  98.6  6e-20  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_011988  Avi_5188  two component response regulator  31.1 
 
 		 220 aa  99  6e-20  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  35.27 
 
 		 214 aa  98.6  6e-20  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  31.73 
 
 		 223 aa  98.6  6e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  28.92 
 
 		 218 aa  99  6e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  32.73 
 
 		 219 aa  99  6e-20  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_004578  PSPTO_0897  DNA-binding response regulator, LuxR family  34.58 
 
 		 207 aa  98.6  7e-20  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  35.58 
 
 		 216 aa  98.6  7e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_010571  Oter_2926  two component LuxR family transcriptional regulator  34.15 
 
 		 223 aa  98.6  7e-20  Opitutus terrae PB90-1  Bacteria  normal  0.380263  normal  1 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  34.95 
 
 		 235 aa  98.2  9e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  31.67 
 
 		 219 aa  97.4  1e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  32.35 
 
 		 221 aa  97.4  1e-19  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>