Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_2926 |
Symbol | |
ID | 6208705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 3742712 |
End bp | 3743383 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641692591 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001819807 |
Protein GI | 182414741 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.380263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGGA CTGACTTCAC CGCACCGCAA GTCACGCGCC CCGAATCCGG CGCCACGATT CGCGTCCTCG TCGTAGATGA TCATCCGCCG ATGCGCGTCG GGTTGGTCGC GCTCATCAGA AGCCAGCCCG GAATGGACGT CGTGGCCGAA GCGTCCGACG GCGAGGAAGC GATCGAGATC TACGACGACC TCCAACCCGA CGTGGTTCTC ATGGATCTGC GCATGCCGGG GATGGGCGGC GTGGAGGCGA TTCTGGCCAT CCGCAAAAAG GCCCCCGAAG CGCGCGTCAT CGTGCTCTCC ACCTACGACT GGGACGAAGA CATCCACCGC GCCCTCCAGT CCGGCGCAAA ATCCTATTTG CTCAAGGACA TGCCGATCGA GGAGATCGCG AGCACGGTGC GGGCCGTGTA CGCGGGCGAC ACCTCACTTC CGCGCTCCGT GGCGGAGCGG CTGACGGAGC GCGCGCAACG GGAGCAGCTC ACCGAGCGCG AGCGCGACGT GCTCGAATCG CTGATCAAGG GTCGCAGCAA CAAGGAAATC GCTTCCAGCC TGTGCATCTC CGAAGACACG GTGAAATCCC ACCTCAAGAC GCTGTTCGCG AAACTGCGCG TCCGCGACCG CACCGGCGCC GCGATCGAGG CGATTCGGCA TGGGATTGTA CACCTGAAAT AG
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Protein sequence | MPGTDFTAPQ VTRPESGATI RVLVVDDHPP MRVGLVALIR SQPGMDVVAE ASDGEEAIEI YDDLQPDVVL MDLRMPGMGG VEAILAIRKK APEARVIVLS TYDWDEDIHR ALQSGAKSYL LKDMPIEEIA STVRAVYAGD TSLPRSVAER LTERAQREQL TERERDVLES LIKGRSNKEI ASSLCISEDT VKSHLKTLFA KLRVRDRTGA AIEAIRHGIV HLK
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