Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2486 |
Symbol | |
ID | 5369879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2967775 |
End bp | 2968437 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830699 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001366686 |
Protein GI | 153001005 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.637953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTAG AAAACTTAAA TATTATTATC GCAGACGATC ATCCATTGTT CAGAAATGCA CTACGTCAAG CACTGACCAC AGCGTTTGAG CATGCACAAT GGTTTGAAGC CGACAGTGCT GACGCACTGC AAGCTGTGTT GGATGTCCGT AGCGTCGATT ACGATCTTGT ACTGTTAGAT TTGCAGATGC CCGGTTCCCA CGGCTACTCC ACACTTATTC ACCTACGCTC ACATTATCCC GATTTACCCG TGGTAGTGAT TTCTGCACAC GAGGATATCA ATACCATTAG CCGTGCGATT CATTATGGGA GCAGTGGTTT TATCCCTAAA TCGGCCTCGA TGGAAACCCT TAAAGAGGCA CTGAGTGCGG TGTTATTCGG TGACATTTGG CTGCCTAAAG GCACTGAGAT TATTTCTATC GATGACGACG CCGTTGATAA AATGGCCAGC AAATTATCCG ATCTCACGCC GCAGCAATAT AAAGTGTTGC AGATGTTTGC CGAAGGTTTG TTGAATAAGC AAATTGCCTA TGATCTTGGC GTCTCTGAAG CGACCATCAA AGCGCACGCG ACTGCCATTT TTAGAAAACT GGGCGTTCGT AACCGAACAC AAGCCGTCAT AGCTCTTGCT CAGCTTGAGA TGGATAAAGT TGATTTATCT TAA
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Protein sequence | MKLENLNIII ADDHPLFRNA LRQALTTAFE HAQWFEADSA DALQAVLDVR SVDYDLVLLD LQMPGSHGYS TLIHLRSHYP DLPVVVISAH EDINTISRAI HYGSSGFIPK SASMETLKEA LSAVLFGDIW LPKGTEIISI DDDAVDKMAS KLSDLTPQQY KVLQMFAEGL LNKQIAYDLG VSEATIKAHA TAIFRKLGVR NRTQAVIALA QLEMDKVDLS
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