| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3138 |
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| Symbol | |
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| ID | 5870923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3513887 |
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| End bp | 3514552 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641548254 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001669366 |
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| Protein GI | 167034135 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.892266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAAAA TTTTGATTGC CGACGATCAC CCCCTGTTTC GCGAAGCCAT CCACAACGTC
ATCAGCGATG GTTTCCAGGG CAGTGAAGTC ATGGAAACCG CCGACCTGGA CAGCGCCTTG
GCACTGACTC AGGCACACGA CGACCTCGAC CTGATCCTGC TCGACCTGAA CATGCCCGGC
ATGCATGGCC TCAACGGCCT GATCACCCTG CGCAACGAGG CACCGACCAC GCCGGTGGTG
ATCGTTTCGG CCGAGCAGGA AAAGCAAATC GTGCTGCAGG CCATTACCTA CGGCGCCGTG
GGTTTCATCA CCAAGTCCTC GCCACGCTCA CAGATGATCG AAGCGATCGA GCAAATCCTC
AATGGCAATG TGTACCTGCC GCCCGACATC ATCCGCGCCC AGAAAAGCAG CACCAGCCGG
CGCCACAACG ACGCCCCGAG CTTCCCGCCG GAAATGCTCC AGGCCCTGAC CCGCAAGCAG
CTGCTGGTGC TCGAGCGCAT GACCAAAGGC GAATCGAACA AACAGATTGC CTACACCCTG
GATATCGCCG AAACCACGGT CAAGGCCCAC GTTTCGGCGA TATTGCGCAA ACTCAATGTG
CACAACCGGG TGCAGGCGAT CCTGAGTGCC GGCGATATCG ATTTCGCCGA TTACCTACGG
CGTTGA
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| Protein sequence | MYKILIADDH PLFREAIHNV ISDGFQGSEV METADLDSAL ALTQAHDDLD LILLDLNMPG
MHGLNGLITL RNEAPTTPVV IVSAEQEKQI VLQAITYGAV GFITKSSPRS QMIEAIEQIL
NGNVYLPPDI IRAQKSSTSR RHNDAPSFPP EMLQALTRKQ LLVLERMTKG ESNKQIAYTL
DIAETTVKAH VSAILRKLNV HNRVQAILSA GDIDFADYLR R
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