Gene M446_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagM446_2139 
Symbol 
ID6130858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium sp. 4-46 
KingdomBacteria 
Replicon accessionNC_010511 
Strand
Start bp2388070 
End bp2388804 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content71% 
IMG OID641642367 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001769035 
Protein GI170740380 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0202732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.168937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGTA TGCCCCTCCT GCCCATACAA CAGCCCAGGG AGATGAAAGA TCTGAGCATG 
GTTCAACAGA CGGCGCCCGT GGCCCTGATC GCCGACGACG ACGAGTTCTT CCGTCTGGCG
ATGGTGGCGA TCCTCAATCG GAGCCTTGGC TTCGGCGAGG TCGTCGAGAC CGGGTCGCTG
GACGCAGCCC TGGACCAGCT CGCCCAGCGG GCGAACGGCA TCACCCTCGC CCTGTTCGAC
CTGGCGATGC CGGGCATGGA GGGGCCGGGC AGCCTGAGCG CGGTGCGGGA GTGCTTCCCG
TGGGTGAAGG TGGCGGTGGT CTCGGGATCC AGCGAGCGGC ACAAGATCCT GGCGGCCCTG
GAAGTGGGCG TGCACGGCTA CGTGCCCAAG GGGCTCGGCT CCTCGGAACT GACCCGGGCG
GTGGGCATGA TCCTCGACGG GCAGATCTAC GTGCCGCCCT CCCTGGCGGT GCTCGACGGG
CCGGCCCGCC CGGCGGCGCC GCGCGCCGCG CCCGACTCGG AGAGCCTGCG CCCCGGGCGC
ACGGTCGAAC TCACGCCGCG GCAGCGCGAC GTGCTGGCCC TGCTCGTCGA GGGGAAGTCG
AACAAGGAGA TCGCCCGGCA ATTGCAGCTC GGCGAGGGCA CCGTGAAGGT GCACATGGCG
GCGCTCCTGC GCAGCCTCGG CGTGCAGAAC CGCGCCGCCG CCGCGGTGGT GGGCGCGCGG
CTCCTGTCCG GCTGA
 
Protein sequence
MDGMPLLPIQ QPREMKDLSM VQQTAPVALI ADDDEFFRLA MVAILNRSLG FGEVVETGSL 
DAALDQLAQR ANGITLALFD LAMPGMEGPG SLSAVRECFP WVKVAVVSGS SERHKILAAL
EVGVHGYVPK GLGSSELTRA VGMILDGQIY VPPSLAVLDG PARPAAPRAA PDSESLRPGR
TVELTPRQRD VLALLVEGKS NKEIARQLQL GEGTVKVHMA ALLRSLGVQN RAAAAVVGAR
LLSG