Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2570 |
Symbol | |
ID | 3672546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2643729 |
End bp | 2644403 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637711276 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_316328 |
Protein GI | 74318588 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.282998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.225314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT CATCATGCAG GAGCGCGCAG TTGAAAACCC TGTTGGCCGA CGACCACCCG CTCATGCGCG AGGGCGTGCG CCAGGTTCTG TCGCAGCTCG AGCCGCCGGT CGAAATCATC GACGCGCACG ACTACCCGAG TCTGTTCGCG CAGACCGCCT TGCATGCCGA TCTCGACCTC GCCGTCGTCG ACCTCAACAT GCCCGGCTTC GTCGGCGTGC AAGGCATCAG CCAGTTCCGC GCGCGCTTCC CGGACGTGCC GCTGGTCGTG CTTTCCGCAT CCGAGTCCTC GCACGACATC CGCAGCGTGC TCGAAGCCGG CGCGCTCGGC TACATCCCCA AGGCGGCGTC GAGCGCGACC ATGCTCGCGG CGCTGCAGCA AGTACTCGCC GGCGATATCT ACATCCCGAC ATGTCCGCCC GCCGTGCGTG AAGACGGCCC GCGCGGCGCA CGCACGGCCG ATTTCGACGC GCTGCAGCAC AGCGGGCTCA CCGCGCGCCA GCTCGAGGTC GCCCGCCTGC TCGCGCAGGG CTGCGCGAAC AAGGCCATCG CGGGAAGCCT CGCCATGTCC GAAAGCACGG TCAAGGTGCA CATCGCGGCG ATTTTTCGTG CCTTGAGCGT CACCAACCGC ACCGAAGCCG TGCTGGCGAT CCAGCGCCTC ACGCAAGGCT CGTGA
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Protein sequence | MPLSSCRSAQ LKTLLADDHP LMREGVRQVL SQLEPPVEII DAHDYPSLFA QTALHADLDL AVVDLNMPGF VGVQGISQFR ARFPDVPLVV LSASESSHDI RSVLEAGALG YIPKAASSAT MLAALQQVLA GDIYIPTCPP AVREDGPRGA RTADFDALQH SGLTARQLEV ARLLAQGCAN KAIAGSLAMS ESTVKVHIAA IFRALSVTNR TEAVLAIQRL TQGS
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