Gene Hhal_1965 details

Gene Information

• Locus tag: Hhal_1965
• ID: 4710460
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhodospira halophila SL1
• Kingdom: Bacteria
• Replicon accession: NC_008789
• Strand: +
• Start bp: 2162082
• End bp: 2162735
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 639856438
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_001003531
• Protein GI: 121998744
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATCC TGCTTGTCGA TGATCACCAG CTCTTCCGCG CCGCCCTGCA GGAGCTGCTC 
AATGCCCAGG GGCTGACCAC CGAGAGCGGC TCCGGTCAGG ACGATGTCCT CGGCCTCGTG 
GACTCGTTCG GGCCCGACCT GGTCCTGCTC GATCTGCGCA TGCCGGGACA GGACGGCCTG 
GCCGTGCTAC GCCAGATCCA TGAGCGCCAC CCCGGCCTGC CGGTGGTCAT GCTCACCGGC 
AGCGAAGAAG AGCGCGACCT GTTCGACTGC CTGCGTGCCG GCGCCCAGGG GTATCTGCTC 
AAGCACAACG ACCCCGAGTA CCTGATCTCG GCCCTGCATC AAGCCACCGA CGGCAAGATC 
GCCGTGGCGC CCCAGCTCAC CGATACCCTG GCTCGGGCCC TGGGGCAGCC GCCGGACCGC 
ACGGAGCCGG GCCCGCCCGA TCCCTTCGCC GGCCTCACCC CACGCGAACG CGACATCCTG 
GAACGCCTGG CCGCCGGCGA GAGCAACAAG GTGATCGCGC GGCATCTCGG CATCTCCGAC 
GGCACGGTCA AGCTCCACGT CAAGTCCGTG CTGCGCAAGC TGGGGGTTCA CTCCCGCGTC 
GAAGCGGCCA TCAAGGCCGT GGACTTCGGC CTGACCCGCC GGACCACCAC CTGA 

 

Protein sequence

MRILLVDDHQ LFRAALQELL NAQGLTTESG SGQDDVLGLV DSFGPDLVLL DLRMPGQDGL 
AVLRQIHERH PGLPVVMLTG SEEERDLFDC LRAGAQGYLL KHNDPEYLIS ALHQATDGKI 
AVAPQLTDTL ARALGQPPDR TEPGPPDPFA GLTPRERDIL ERLAAGESNK VIARHLGISD 
GTVKLHVKSV LRKLGVHSRV EAAIKAVDFG LTRRTTT