Gene PA14_38930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_38930 
Symbol 
ID4382775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3469644 
End bp3470309 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID639325693 
Productputative transcriptional regulator 
Protein accessionYP_791262 
Protein GI116049929 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAGA TCCTGATCGC CGACGACCAC CCGCTGTTCC GCGAGGCCAT CCACAATGTC 
ATCGCCGACG GATTCCCCGG CAGCGAAGTG ATGGAAACCG CCGACCTCGA CAGCGCCCTG
GGCCTGACCC AGGAACACGA CGACCTCGAC CTGATCCTGC TCGACCTGAA CATGCCCGGC
ATGCACGGCC TCAACGGCCT GATGAACCTG CGCAACGAGG CCCCGACCAT TCCCGTGGTT
ATCGTCTCCG CCGAGCAGGA CAAGCAGGTG GTGCTACAGG CCATCACCTA CGGCGCGGTG
GGCTTCATCA CCAAGTCCTC GCCACGCGCG CAGATGACCG AAGCCATCGA GCAGATCCTC
AACGGCAACG TCTACCTGCC CTCGGACGTG ATCCGCACCC AGAAGAGTTC GCCGCGACGC
AGCGGCCACG AAGAACACGG CATCTCCCCG GAACTGCTCC AGGCCCTGAC CCGCAAGCAG
CTGCTGGTGC TGGAGCGGAT GACCAAGGGC GAGTCGAACA AGCAGATCGC CTACAACCTG
GACATCGCCG AGACCACGGT GAAGGCGCAC GTCTCGGCGA TCCTGCGCAA GCTCAAGGTA
CACAACCGGG TCCAGGCGAT CCTCAGCGCC GGCGACATCG ACTTCGCCGC CTACCTGCGC
CGCTGA
 
Protein sequence
MYKILIADDH PLFREAIHNV IADGFPGSEV METADLDSAL GLTQEHDDLD LILLDLNMPG 
MHGLNGLMNL RNEAPTIPVV IVSAEQDKQV VLQAITYGAV GFITKSSPRA QMTEAIEQIL
NGNVYLPSDV IRTQKSSPRR SGHEEHGISP ELLQALTRKQ LLVLERMTKG ESNKQIAYNL
DIAETTVKAH VSAILRKLKV HNRVQAILSA GDIDFAAYLR R