More than 300 homologs were found in PanDaTox collection
for query gene M446_4981 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010511  M446_4981  two component LuxR family transcriptional regulator  100 
 
 		 244 aa  499  1e-140  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_3347  two component LuxR family transcriptional regulator  56.81 
 
 		 234 aa  228  6e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.563314  normal  1 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  38.12 
 
 		 228 aa  127  1.0000000000000001e-28  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  34.96 
 
 		 230 aa  115  8.999999999999998e-25  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  32.7 
 
 		 227 aa  114  1.0000000000000001e-24  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010172  Mext_3579  regulatory protein LuxR  32.85 
 
 		 213 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  0.0227422  normal  1 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  34.91 
 
 		 223 aa  109  3e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  37.27 
 
 		 245 aa  109  4.0000000000000004e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_010172  Mext_4345  regulatory protein LuxR  33.03 
 
 		 216 aa  109  4.0000000000000004e-23  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_4862  two component transcriptional regulator, LuxR family  34.1 
 
 		 215 aa  109  4.0000000000000004e-23  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.146847 
 
 
-
 
NC_011757  Mchl_4714  two component transcriptional regulator, LuxR family  33.03 
 
 		 216 aa  109  5e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.375128 
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  35.62 
 
 		 244 aa  106  4e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
NC_010505  Mrad2831_4801  two component LuxR family transcriptional regulator  33.49 
 
 		 223 aa  103  3e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.136897 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  32.24 
 
 		 217 aa  98.6  8e-20  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  34.08 
 
 		 224 aa  98.2  1e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  33.02 
 
 		 219 aa  98.2  1e-19  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  32.85 
 
 		 212 aa  96.7  3e-19  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.383896 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  32.56 
 
 		 224 aa  96.3  4e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  31.98 
 
 		 248 aa  96.3  4e-19  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  32.72 
 
 		 227 aa  95.1  9e-19  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  29.81 
 
 		 206 aa  94  2e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  32.39 
 
 		 221 aa  93.2  4e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  31.4 
 
 		 209 aa  92.8  4e-18  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  32.18 
 
 		 213 aa  93.2  4e-18  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012880  Dd703_1766  transcriptional regulator NarL  33.17 
 
 		 216 aa  92  7e-18  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  32.35 
 
 		 210 aa  92.4  7e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  31.16 
 
 		 252 aa  92  7e-18  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  30.62 
 
 		 208 aa  91.7  9e-18  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  28.18 
 
 		 224 aa  91.7  9e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  31.13 
 
 		 221 aa  91.3  1e-17  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  31.96 
 
 		 216 aa  91.7  1e-17  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  32.51 
 
 		 239 aa  91.7  1e-17  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  29.52 
 
 		 221 aa  90.5  2e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_013093  Amir_6525  two component transcriptional regulator, LuxR family  29.85 
 
 		 216 aa  90.9  2e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  30.24 
 
 		 209 aa  90.1  3e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  31.25 
 
 		 210 aa  90.1  3e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_007947  Mfla_0445  two component LuxR family transcriptional regulator  31.48 
 
 		 212 aa  90.1  3e-17  Methylobacillus flagellatus KT  Bacteria  decreased coverage  0.0000000143028  normal  0.869605 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  30.24 
 
 		 209 aa  90.1  3e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  29.05 
 
 		 211 aa  90.1  3e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  28.37 
 
 		 220 aa  89.4  5e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  31.37 
 
 		 217 aa  89  7e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  28.96 
 
 		 221 aa  88.6  8e-17  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3810  two component transcriptional regulator, LuxR family  28.44 
 
 		 236 aa  88.6  9e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.225059  normal  0.0261757 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.51 
 
 		 226 aa  88.6  9e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  31.16 
 
 		 230 aa  88.6  9e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  28.64 
 
 		 224 aa  88.2  1e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_4012  transcriptional regulator NarL  28.77 
 
 		 214 aa  87.8  1e-16  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  31.6 
 
 		 219 aa  87.8  1e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0920509 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  31.9 
 
 		 239 aa  87.4  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5911  two component LuxR family transcriptional regulator  31.34 
 
 		 219 aa  87  2e-16  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  29.72 
 
 		 215 aa  87.4  2e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  29.3 
 
 		 215 aa  87.4  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0649  LuxR family two component transcriptional regulator  31.47 
 
 		 212 aa  87  2e-16  Thermobispora bispora DSM 43833  Bacteria  normal  0.93281  normal  0.368826 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  28.91 
 
 		 209 aa  86.3  4e-16  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  27.96 
 
 		 228 aa  86.3  4e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_009832  Spro_2900  transcriptional regulator NarL  31.86 
 
 		 216 aa  86.3  4e-16  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1309  two component LuxR family transcriptional regulator  32.38 
 
 		 206 aa  86.3  4e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.000148999  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  29.44 
 
 		 219 aa  86.3  4e-16  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_008697  Noca_4896  response regulator receiver  31.28 
 
 		 215 aa  85.9  5e-16  Nocardioides sp. JS614  Bacteria  normal  0.446448  normal  0.220667 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  27.62 
 
 		 222 aa  85.9  6e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_04820  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  30.35 
 
 		 229 aa  85.5  7e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.465009  normal  1 
 
 
-
 
NC_009719  Plav_3606  two component LuxR family transcriptional regulator  29.95 
 
 		 208 aa  85.1  8e-16  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  31.55 
 
 		 222 aa  85.5  8e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2582  LuxR response regulator receiver  31.34 
 
 		 233 aa  85.5  8e-16  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  30.24 
 
 		 212 aa  85.5  8e-16  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.996792 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  31.8 
 
 		 215 aa  85.1  9e-16  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  29.3 
 
 		 216 aa  85.1  9e-16  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  30.05 
 
 		 219 aa  85.1  9e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_008781  Pnap_2689  two component LuxR family transcriptional regulator  30.62 
 
 		 224 aa  85.1  9e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.270095  normal  0.632538 
 
 
-
 
NC_012856  Rpic12D_1738  two component transcriptional regulator, LuxR family  30.35 
 
 		 219 aa  84.7  0.000000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.0459515  normal  0.949758 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  31.92 
 
 		 219 aa  85.1  0.000000000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_009901  Spea_1733  two component LuxR family transcriptional regulator  31.88 
 
 		 210 aa  84.7  0.000000000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.137963  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  27.65 
 
 		 220 aa  84.7  0.000000000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  28.5 
 
 		 218 aa  84.7  0.000000000000001  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  31.25 
 
 		 244 aa  84.7  0.000000000000001  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  30.05 
 
 		 219 aa  84.3  0.000000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  31.11 
 
 		 226 aa  84  0.000000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  31.37 
 
 		 209 aa  84  0.000000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  29.81 
 
 		 216 aa  83.6  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  30.94 
 
 		 232 aa  84  0.000000000000002  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  30.52 
 
 		 224 aa  83.6  0.000000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_003295  RSc2455  response regulator VSRC transcription regulator protein  29.47 
 
 		 221 aa  83.6  0.000000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_2046  two component transcriptional regulator, LuxR family  29.27 
 
 		 219 aa  83.6  0.000000000000003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_2334  two component transcriptional regulator, LuxR family  29.41 
 
 		 221 aa  83.2  0.000000000000003  Ralstonia pickettii 12D  Bacteria  normal  0.477601  normal  0.267999 
 
 
-
 
NC_010682  Rpic_2723  two component transcriptional regulator, LuxR family  29.41 
 
 		 221 aa  83.2  0.000000000000003  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_46360  putative two-component response regulator  32.86 
 
 		 210 aa  83.6  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.016821 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  27.75 
 
 		 220 aa  82.8  0.000000000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  31.13 
 
 		 218 aa  83.2  0.000000000000004  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  29.49 
 
 		 216 aa  83.2  0.000000000000004  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_013947  Snas_0625  two component transcriptional regulator, LuxR family  30.73 
 
 		 216 aa  82.8  0.000000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.732521  normal  1 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  30.09 
 
 		 210 aa  83.2  0.000000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  27.54 
 
 		 210 aa  83.2  0.000000000000004  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  29.36 
 
 		 215 aa  82.8  0.000000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1518.1  DNA-binding response regulator  27.18 
 
 		 223 aa  82.4  0.000000000000005  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.000399536  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0560  DNA-binding response regulator  27.18 
 
 		 223 aa  82.4  0.000000000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0224831  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  31.8 
 
 		 215 aa  82.8  0.000000000000005  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  29 
 
 		 240 aa  82.4  0.000000000000005  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_008835  BMA10229_2085  DNA-binding response regulator  27.18 
 
 		 264 aa  82.8  0.000000000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.844485  n/a   
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  29.41 
 
 		 210 aa  82.8  0.000000000000005  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_009049  Rsph17029_1249  two component LuxR family transcriptional regulator  29.67 
 
 		 235 aa  82.4  0.000000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
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