| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2455 |
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| Symbol | vsrC |
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| ID | 1221302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2661423 |
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| End bp | 2662088 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238856 |
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| Product | response regulator VSRC transcription regulator protein |
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| Protein accession | NP_520576 |
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| Protein GI | 17547174 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGAGCT CGCTGCGTAG CCTGCTGGTG GTCGATGACC ACCCTCTCGC CTTATCTGGC
ACGACCACTT TTCTTGCGCA AGCCCTGCCT GAAATCCAAG TCCATGCGGC CATCGGCCGG
CGTCAGGCCC TGGCGCTGAT CGACGAGGGC ATCCGCCCGG ACGTGGTCCT GCTGGATGTC
TGGCTGTCCG ACTGCACGGG TTTCGACGCG ATGCGCGAAC TGCGCGGCAA GCTGCCCGAG
GCGCGCTTCG CCTTCATGTC GGCCGAGAAC ACGCCGGAAA TCGTCGCGAA AGCACAGGCG
CTGGGCGCCA TCGGGTTCAT CGGCAAGCAC GCCGACGCAC ACGCGTTCTC GCAGGCGGTG
GCGGGCATTT TCGGCGGGGA CTCGTCGTTC CCGTCGGAAG ACGACCTGGG CATGGCCAAC
GGCAAGAACG GCGCCTCCCA CGGCATCCCC ATCACGCCGG CCGAACTGGG CCTGACGCCG
CGCCAGGGTT CGGTGCTGGC ACTGCTGCTC GAAGGGTTGC CGAACAAATC CATCGCGCGC
CAACTGGGCC TGACGGAGAA CACCGTCAAG GAACACGTCT CGGCGATCCT GCAGCGGCTG
GGCGTGCGCA CGCGCATCCA GATCATCTCG CGCATGGAGC GCTTCCGCCT GACCGGCTCG
GCCTGA
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| Protein sequence | MTSSLRSLLV VDDHPLALSG TTTFLAQALP EIQVHAAIGR RQALALIDEG IRPDVVLLDV
WLSDCTGFDA MRELRGKLPE ARFAFMSAEN TPEIVAKAQA LGAIGFIGKH ADAHAFSQAV
AGIFGGDSSF PSEDDLGMAN GKNGASHGIP ITPAELGLTP RQGSVLALLL EGLPNKSIAR
QLGLTENTVK EHVSAILQRL GVRTRIQIIS RMERFRLTGS A
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