| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3606 |
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| Symbol | |
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| ID | 5455066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3860365 |
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| End bp | 3860991 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640879190 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001414861 |
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| Protein GI | 154254037 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGAGG AACGCATCAT CGTTGCCGAC GATCATCCGG TTTTCAGGAT GGGGATGCGG
CATATTCTGG CGCGCGTTTC GCCCGGCGCG GCAATCGAGG AGGCGGGGAC GTTCGAGGAG
GTGCTGGCGC TTTCCAGAAG CGGCGCGGCG CCAGCCATGT TCGTGCTCGA CCTGGTGTTT
CCCGGTTTTG CGGCCGAAAC GTCGATTGCC GATCTGCGGC GGCGCTTTCC ACGCGCGACG
CTCGCCATCG TCTCCATGGC CGACGATGCC GAGACCATCG ACCTCGTGAT GGCGGCGGGC
GCCGACGGTT TTGTCGGCAA GGCGGTGCCG CCGGAGGAGA TCGCCGAGGC GCTGGGCGCG
ATCCGCGCCG GCGAAATCGT GGTGCGGTCG GCCGCGCCCG ACCTGCCATC GGCACCGGGA
CGGGCGGCGG GCGAAGACGA GGTGCAGCTT TCGCCGCGCC AGCGCGAAGT GCTGCGGCTC
GTCGCCACCG GCATGACCAA CAAGGAAATC GGGCGCCAGC TCGGCATATC GCCGGTGACG
GCGCGGATGC ATGTGTCGGC GCTCTTGCGC ACGCTCGGCG TGCCGAGCCG CGCGGCGGCG
GCGGCGGTGG CGGACCGTCT TCTCTGA
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| Protein sequence | MAEERIIVAD DHPVFRMGMR HILARVSPGA AIEEAGTFEE VLALSRSGAA PAMFVLDLVF
PGFAAETSIA DLRRRFPRAT LAIVSMADDA ETIDLVMAAG ADGFVGKAVP PEEIAEALGA
IRAGEIVVRS AAPDLPSAPG RAAGEDEVQL SPRQREVLRL VATGMTNKEI GRQLGISPVT
ARMHVSALLR TLGVPSRAAA AAVADRLL
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