More than 300 homologs were found in PanDaTox collection
for query gene Ajs_0555 on replicon NC_008782
Organism: Acidovorax sp. JS42



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  100 
 
 		 232 aa  458  9.999999999999999e-129  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  45.1 
 
 		 216 aa  158  7e-38  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  41.36 
 
 		 227 aa  158  8e-38  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  43.69 
 
 		 210 aa  150  2e-35  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  40.27 
 
 		 248 aa  148  7e-35  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  38.6 
 
 		 221 aa  145  6e-34  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  38.43 
 
 		 219 aa  140  9.999999999999999e-33  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_011662  Tmz1t_3355  two component transcriptional regulator, LuxR family  40.49 
 
 		 208 aa  136  2e-31  Thauera sp. MZ1T  Bacteria  normal  0.687232  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  36.41 
 
 		 224 aa  137  2e-31  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  37.56 
 
 		 209 aa  132  3.9999999999999996e-30  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  40.18 
 
 		 227 aa  131  9e-30  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  40.2 
 
 		 216 aa  130  3e-29  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  41.09 
 
 		 216 aa  129  4.0000000000000003e-29  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  41.09 
 
 		 216 aa  129  4.0000000000000003e-29  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  42.57 
 
 		 215 aa  129  5.0000000000000004e-29  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  41.09 
 
 		 216 aa  127  1.0000000000000001e-28  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  41.95 
 
 		 215 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  41.95 
 
 		 215 aa  127  2.0000000000000002e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  34.76 
 
 		 218 aa  125  4.0000000000000003e-28  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  40 
 
 		 209 aa  125  6e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  39.05 
 
 		 224 aa  123  2e-27  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  39.8 
 
 		 216 aa  122  4e-27  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  36.1 
 
 		 252 aa  122  6e-27  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  36.53 
 
 		 220 aa  121  9e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  33.96 
 
 		 221 aa  121  9e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  35.1 
 
 		 221 aa  120  1.9999999999999998e-26  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007908  Rfer_2039  two component LuxR family transcriptional regulator  39.64 
 
 		 212 aa  120  3e-26  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  37.25 
 
 		 217 aa  119  3.9999999999999996e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  34.85 
 
 		 249 aa  119  4.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  41.67 
 
 		 215 aa  119  4.9999999999999996e-26  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  36.32 
 
 		 217 aa  118  6e-26  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.332036 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  34.13 
 
 		 226 aa  118  7e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  34.78 
 
 		 219 aa  117  9.999999999999999e-26  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_010625  Bphy_6192  two component LuxR family transcriptional regulator  34.36 
 
 		 231 aa  117  9.999999999999999e-26  Burkholderia phymatum STM815  Bacteria  normal  0.446565  normal  0.0472092 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  38.54 
 
 		 224 aa  117  9.999999999999999e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  33.81 
 
 		 241 aa  117  1.9999999999999998e-25  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  33.17 
 
 		 227 aa  116  3e-25  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_011989  Avi_0584  two component response regulator  35.89 
 
 		 215 aa  116  3e-25  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  39.71 
 
 		 217 aa  116  3e-25  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  39.71 
 
 		 217 aa  116  3e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  33.33 
 
 		 221 aa  116  3.9999999999999997e-25  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  36.89 
 
 		 239 aa  115  6e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  36.32 
 
 		 221 aa  115  6.9999999999999995e-25  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  32.37 
 
 		 222 aa  115  7.999999999999999e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  36.84 
 
 		 221 aa  114  1.0000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  36.32 
 
 		 221 aa  114  2.0000000000000002e-24  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_006348  BMA1736  DNA-binding response regulator NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  36.32 
 
 		 221 aa  114  2.0000000000000002e-24  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_007434  BURPS1710b_2764  DNA-binding response regulator NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  0.922757  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2246  DNA-binding response regulator NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A3072  DNA-binding response regulator NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009074  BURPS668_2630  nitrate/nitrite response regulator protein NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia pseudomallei 668  Bacteria  normal  0.14617  n/a   
 
 
-
 
NC_009076  BURPS1106A_2686  nitrate/nitrite response regulator protein NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_1519  DNA-binding response regulator NarL  35.06 
 
 		 233 aa  113  2.0000000000000002e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.281442  n/a   
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  36.32 
 
 		 221 aa  113  3e-24  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  35 
 
 		 214 aa  112  3e-24  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  34.47 
 
 		 218 aa  113  3e-24  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  34.56 
 
 		 221 aa  112  3e-24  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_007651  BTH_I1849  DNA-binding response regulator NarL  34.33 
 
 		 233 aa  113  3e-24  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  33.65 
 
 		 220 aa  112  3e-24  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  35.21 
 
 		 221 aa  112  3e-24  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  35 
 
 		 214 aa  112  3e-24  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  35.68 
 
 		 217 aa  112  4.0000000000000004e-24  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010623  Bphy_5117  two component LuxR family transcriptional regulator  33.47 
 
 		 253 aa  112  5e-24  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.180541 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  30.66 
 
 		 228 aa  112  5e-24  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  35.71 
 
 		 222 aa  112  5e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  34.63 
 
 		 218 aa  112  6e-24  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  34.63 
 
 		 218 aa  112  6e-24  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  34.15 
 
 		 213 aa  111  8.000000000000001e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3070  two component transcriptional regulator, LuxR family  33.8 
 
 		 216 aa  111  8.000000000000001e-24  Shewanella baltica OS223  Bacteria  decreased coverage  0.000689776  unclonable  0.00000000000283062 
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  34.3 
 
 		 210 aa  111  8.000000000000001e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_1285  two component LuxR family transcriptional regulator  33.8 
 
 		 216 aa  111  8.000000000000001e-24  Shewanella baltica OS185  Bacteria  decreased coverage  0.000337392  n/a   
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  34.3 
 
 		 210 aa  111  8.000000000000001e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1241  two component LuxR family transcriptional regulator  33.8 
 
 		 216 aa  111  8.000000000000001e-24  Shewanella baltica OS155  Bacteria  decreased coverage  0.0000399601  n/a   
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  35.89 
 
 		 222 aa  111  9e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  36.97 
 
 		 223 aa  111  1.0000000000000001e-23  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  36.45 
 
 		 203 aa  111  1.0000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  33.18 
 
 		 220 aa  111  1.0000000000000001e-23  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  37.86 
 
 		 216 aa  110  1.0000000000000001e-23  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  33.17 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  33.17 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  33.17 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  36.36 
 
 		 221 aa  110  2.0000000000000002e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  33.33 
 
 		 212 aa  110  2.0000000000000002e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  34.65 
 
 		 214 aa  110  2.0000000000000002e-23  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  32.68 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  33.66 
 
 		 212 aa  110  2.0000000000000002e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  32.08 
 
 		 222 aa  110  2.0000000000000002e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  35.07 
 
 		 219 aa  110  2.0000000000000002e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.43 
 
 		 216 aa  110  2.0000000000000002e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.68 
 
 		 216 aa  110  2.0000000000000002e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.33 
 
 		 224 aa  110  2.0000000000000002e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  37.38 
 
 		 214 aa  109  3e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  34.15 
 
 		 219 aa  109  3e-23  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_010676  Bphyt_4850  two component transcriptional regulator, LuxR family  33.33 
 
 		 257 aa  109  3e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0778424  normal  0.0399542 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  36.04 
 
 		 215 aa  109  3e-23  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  34.3 
 
 		 210 aa  109  3e-23  Yersinia pestis Angola  Bacteria  normal  1  normal  0.616678 
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  32.24 
 
 		 216 aa  110  3e-23  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  35.12 
 
 		 218 aa  109  3e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  35.41 
 
 		 221 aa  109  4.0000000000000004e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
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