More than 300 homologs were found in PanDaTox collection
for query gene Bphy_5117 on replicon NC_010623
Organism: Burkholderia phymatum STM815



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010623  Bphy_5117  two component LuxR family transcriptional regulator  100 
 
 		 253 aa  501  1e-141  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.180541 
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  83.4 
 
 		 249 aa  410  1e-113  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_010676  Bphyt_4850  two component transcriptional regulator, LuxR family  82.49 
 
 		 257 aa  405  1.0000000000000001e-112  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0778424  normal  0.0399542 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  40.96 
 
 		 227 aa  161  9e-39  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010622  Bphy_1975  two component LuxR family transcriptional regulator  36.68 
 
 		 293 aa  144  1e-33  Burkholderia phymatum STM815  Bacteria  normal  0.0150451  normal  1 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  36.07 
 
 		 224 aa  140  9.999999999999999e-33  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_010681  Bphyt_1379  two component transcriptional regulator, LuxR family  38 
 
 		 292 aa  140  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0210202  hitchhiker  0.00446461 
 
 
-
 
NC_007951  Bxe_A3176  two component LuxR family transcriptional regulator  36.76 
 
 		 292 aa  139  3.9999999999999997e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.0570221  normal  0.472976 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  37.34 
 
 		 227 aa  135  9e-31  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007651  BTH_I1094  DNA-binding response regulator  35.22 
 
 		 279 aa  134  9.999999999999999e-31  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000582737  n/a   
 
 
-
 
NC_007434  BURPS1710b_1471  DNA-binding response regulator  35.22 
 
 		 363 aa  132  6e-30  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.0000000100474  n/a   
 
 
-
 
NC_009076  BURPS1106A_1334  putative DNA-binding response regulator  35.22 
 
 		 279 aa  132  6e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.07086  n/a   
 
 
-
 
NC_009074  BURPS668_1325  putative DNA-binding response regulator  35.22 
 
 		 279 aa  132  6e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.0852238  n/a   
 
 
-
 
NC_006348  BMA1795  DNA-binding response regulator  34.82 
 
 		 279 aa  130  2.0000000000000002e-29  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0488628  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  35.42 
 
 		 210 aa  130  2.0000000000000002e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  36.07 
 
 		 224 aa  130  2.0000000000000002e-29  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_0448  DNA-binding response regulator  34.82 
 
 		 279 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00573595  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1165  DNA-binding response regulator  34.82 
 
 		 279 aa  130  2.0000000000000002e-29  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.0000000742681  n/a   
 
 
-
 
NC_008836  BMA10229_A0704  DNA-binding response regulator  34.82 
 
 		 279 aa  130  2.0000000000000002e-29  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000213253  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  34.31 
 
 		 220 aa  130  3e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  34.84 
 
 		 248 aa  125  5e-28  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  33.19 
 
 		 222 aa  123  3e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  33.88 
 
 		 221 aa  122  6e-27  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010551  BamMC406_2136  two component LuxR family transcriptional regulator  37.2 
 
 		 276 aa  120  9.999999999999999e-27  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00080353  normal  0.948234 
 
 
-
 
NC_008390  Bamb_2257  two component LuxR family transcriptional regulator  37.2 
 
 		 276 aa  121  9.999999999999999e-27  Burkholderia ambifaria AMMD  Bacteria  normal  0.0303794  n/a   
 
 
-
 
NC_007510  Bcep18194_A5547  two component LuxR family transcriptional regulator  36.29 
 
 		 278 aa  120  1.9999999999999998e-26  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000595114  normal  0.307303 
 
 
-
 
NC_010508  Bcenmc03_2243  two component LuxR family transcriptional regulator  37.1 
 
 		 278 aa  120  1.9999999999999998e-26  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000421268  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  34.44 
 
 		 209 aa  120  3e-26  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008060  Bcen_1607  two component LuxR family transcriptional regulator  37.9 
 
 		 278 aa  119  3e-26  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0202468  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  30.45 
 
 		 212 aa  120  3e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_2219  two component LuxR family transcriptional regulator  37.9 
 
 		 278 aa  119  3e-26  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00895129  n/a   
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  34.03 
 
 		 221 aa  117  9.999999999999999e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  32.35 
 
 		 221 aa  115  3.9999999999999997e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  31.95 
 
 		 219 aa  115  6e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_010084  Bmul_1058  two component LuxR family transcriptional regulator  35.08 
 
 		 278 aa  115  6.9999999999999995e-25  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.0000154316  normal  1 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  32.4 
 
 		 224 aa  115  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  31.95 
 
 		 224 aa  114  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  30.71 
 
 		 238 aa  114  1.0000000000000001e-24  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  30.08 
 
 		 221 aa  113  2.0000000000000002e-24  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  31.54 
 
 		 220 aa  113  3e-24  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  33.47 
 
 		 215 aa  113  4.0000000000000004e-24  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  33.19 
 
 		 215 aa  112  4.0000000000000004e-24  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  31.75 
 
 		 220 aa  112  4.0000000000000004e-24  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_011662  Tmz1t_3355  two component transcriptional regulator, LuxR family  34.43 
 
 		 208 aa  112  5e-24  Thauera sp. MZ1T  Bacteria  normal  0.687232  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  32.77 
 
 		 215 aa  112  7.000000000000001e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  31.93 
 
 		 221 aa  111  9e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  31.12 
 
 		 220 aa  111  1.0000000000000001e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  31.35 
 
 		 220 aa  111  1.0000000000000001e-23  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  31.12 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  30.56 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  31.12 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  32.07 
 
 		 216 aa  110  2.0000000000000002e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  31.54 
 
 		 219 aa  110  3e-23  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  30.71 
 
 		 220 aa  110  3e-23  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  33.05 
 
 		 216 aa  110  3e-23  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  32.65 
 
 		 232 aa  109  4.0000000000000004e-23  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  31.54 
 
 		 219 aa  109  4.0000000000000004e-23  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  31.87 
 
 		 243 aa  109  4.0000000000000004e-23  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  30.83 
 
 		 209 aa  109  5e-23  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  29.17 
 
 		 218 aa  108  6e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  32.92 
 
 		 221 aa  108  8.000000000000001e-23  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  30.56 
 
 		 220 aa  108  8.000000000000001e-23  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  33.89 
 
 		 217 aa  108  9.000000000000001e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  34.02 
 
 		 209 aa  108  9.000000000000001e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  33.89 
 
 		 217 aa  108  9.000000000000001e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  30 
 
 		 221 aa  107  1e-22  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  31.8 
 
 		 215 aa  107  1e-22  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  32.78 
 
 		 228 aa  107  1e-22  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  32.92 
 
 		 221 aa  108  1e-22  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  31.97 
 
 		 218 aa  107  2e-22  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  33.19 
 
 		 224 aa  106  3e-22  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  33.19 
 
 		 224 aa  106  3e-22  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  29.32 
 
 		 201 aa  107  3e-22  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  30.83 
 
 		 251 aa  106  3e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  28.8 
 
 		 226 aa  106  4e-22  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  31.38 
 
 		 218 aa  105  5e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  29.88 
 
 		 219 aa  105  6e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  33.19 
 
 		 223 aa  105  8e-22  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  29.88 
 
 		 220 aa  105  1e-21  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  32.22 
 
 		 216 aa  103  2e-21  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  30.42 
 
 		 219 aa  103  2e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  30.42 
 
 		 251 aa  103  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  32.22 
 
 		 216 aa  103  3e-21  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  32.22 
 
 		 216 aa  103  3e-21  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  32.35 
 
 		 225 aa  103  3e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  27.62 
 
 		 219 aa  102  4e-21  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  32.78 
 
 		 209 aa  102  4e-21  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  32.64 
 
 		 216 aa  102  6e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  30.61 
 
 		 210 aa  102  6e-21  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  30.54 
 
 		 221 aa  102  6e-21  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  30 
 
 		 219 aa  102  7e-21  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  33.33 
 
 		 217 aa  102  8e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  29.92 
 
 		 221 aa  102  8e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  30.8 
 
 		 209 aa  101  1e-20  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  30.17 
 
 		 204 aa  101  1e-20  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  30.99 
 
 		 214 aa  101  1e-20  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  29.92 
 
 		 221 aa  101  1e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  30 
 
 		 209 aa  101  1e-20  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  29.8 
 
 		 210 aa  100  2e-20  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  27.94 
 
 		 213 aa  100  2e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
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