| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2136 |
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| Symbol | |
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| ID | 6175991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2388191 |
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| End bp | 2389021 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641681908 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001808831 |
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| Protein GI | 172061179 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00080353 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.948234 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGTTCC TGGTGTTGAA CTCAGACGCC GAACGGCGTG ACGGACTGAA GGCCCTGCTG
CGGCAGATCG ACCGTCACGC CAGCATCAAC GACGCGCCCG ACGGTTTCCA GGCGCGCCGA
TTGCTGCGCG CCCAGCGTTT CGACCTCGTC GCAATCAACT GGCCGGACGT CGGCCGGCTC
AGCGAACTGC AGGCACTCTG CAGCGCCTGC TCGCCGACGC CCGCCGCGGT GTTGATCGAC
GAATCCACGC CGGAAGCCAT CCAGCGCTTC TACAACTACG GCGTCGCGGG CGTGATCCCG
CACTCCATGC GGCCGCACCT GATCGTGCGG GCTCTCGAAA TGGTCCTGCT GGGCGGGCAC
TACATTCCGC CCATTGCGCT CAGCTTGCTG CCCTCTGCCG CCGCGGCCCG CCACGACGCC
CATTTCCAGA CGCTCGCCGG ATCGCTGCCG CGCCGCCCGG CAAGCCGCCT CCTGTCGCCG
AGACAGGCGC AGATCATGCG CTTCGTCCAC ATGGGCAACA CCAACAAGAT GATCGCCCGC
ACGCTCGGCA TCAGCGAAGG CACCGTAAAG ATCCACCTCG CCAGCATCTT CCAGCAGCTT
GGCGCGGCAA ACCGGGCCGC GGCCGTCGCG ATCTACAACG GCTGGCTGTC GCCGCATCTC
GAGGTGCTGC TGGCGAACCG TGAGCGTGCG CAAAAACCGA CCATCGGCGA ACGCGGCCCG
GTTCCGCTGC GCATGCAACG GAAGAACCGT CCGTATCCGC TGCCGGACGC AAACACCGCG
GACCTGCCGC TCGCGGCCGA ACCGCCGGCG CGGTTTCGGC GCGAACGCTA G
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| Protein sequence | MRFLVLNSDA ERRDGLKALL RQIDRHASIN DAPDGFQARR LLRAQRFDLV AINWPDVGRL
SELQALCSAC SPTPAAVLID ESTPEAIQRF YNYGVAGVIP HSMRPHLIVR ALEMVLLGGH
YIPPIALSLL PSAAAARHDA HFQTLAGSLP RRPASRLLSP RQAQIMRFVH MGNTNKMIAR
TLGISEGTVK IHLASIFQQL GAANRAAAVA IYNGWLSPHL EVLLANRERA QKPTIGERGP
VPLRMQRKNR PYPLPDANTA DLPLAAEPPA RFRRER
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