More than 300 homologs were found in PanDaTox collection
for query gene BamMC406_2136 on replicon NC_010551
Organism: Burkholderia ambifaria MC40-6



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010551  BamMC406_2136  two component LuxR family transcriptional regulator  100 
 
 		 276 aa  555  1e-157  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00080353  normal  0.948234 
 
 
-
 
NC_008390  Bamb_2257  two component LuxR family transcriptional regulator  99.28 
 
 		 276 aa  550  1e-156  Burkholderia ambifaria AMMD  Bacteria  normal  0.0303794  n/a   
 
 
-
 
NC_007510  Bcep18194_A5547  two component LuxR family transcriptional regulator  87.05 
 
 		 278 aa  469  1.0000000000000001e-131  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000595114  normal  0.307303 
 
 
-
 
NC_010508  Bcenmc03_2243  two component LuxR family transcriptional regulator  86.69 
 
 		 278 aa  459  9.999999999999999e-129  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000421268  normal  1 
 
 
-
 
NC_008060  Bcen_1607  two component LuxR family transcriptional regulator  85.97 
 
 		 278 aa  455  1e-127  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0202468  n/a   
 
 
-
 
NC_008542  Bcen2424_2219  two component LuxR family transcriptional regulator  85.97 
 
 		 278 aa  455  1e-127  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00895129  n/a   
 
 
-
 
NC_010084  Bmul_1058  two component LuxR family transcriptional regulator  82.18 
 
 		 278 aa  440  1e-123  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.0000154316  normal  1 
 
 
-
 
NC_007651  BTH_I1094  DNA-binding response regulator  67.15 
 
 		 279 aa  353  2e-96  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000582737  n/a   
 
 
-
 
NC_009076  BURPS1106A_1334  putative DNA-binding response regulator  65.34 
 
 		 279 aa  347  1e-94  Burkholderia pseudomallei 1106a  Bacteria  normal  0.07086  n/a   
 
 
-
 
NC_009074  BURPS668_1325  putative DNA-binding response regulator  64.98 
 
 		 279 aa  347  1e-94  Burkholderia pseudomallei 668  Bacteria  normal  0.0852238  n/a   
 
 
-
 
NC_007434  BURPS1710b_1471  DNA-binding response regulator  65.34 
 
 		 363 aa  346  2e-94  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.0000000100474  n/a   
 
 
-
 
NC_006348  BMA1795  DNA-binding response regulator  64.98 
 
 		 279 aa  346  3e-94  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0488628  n/a   
 
 
-
 
NC_009080  BMA10247_0448  DNA-binding response regulator  64.98 
 
 		 279 aa  346  3e-94  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00573595  n/a   
 
 
-
 
NC_008836  BMA10229_A0704  DNA-binding response regulator  64.98 
 
 		 279 aa  346  3e-94  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000213253  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1165  DNA-binding response regulator  64.98 
 
 		 279 aa  346  3e-94  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.0000000742681  n/a   
 
 
-
 
NC_010681  Bphyt_1379  two component transcriptional regulator, LuxR family  55.11 
 
 		 292 aa  256  3e-67  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0210202  hitchhiker  0.00446461 
 
 
-
 
NC_007951  Bxe_A3176  two component LuxR family transcriptional regulator  54.38 
 
 		 292 aa  253  2.0000000000000002e-66  Burkholderia xenovorans LB400  Bacteria  normal  0.0570221  normal  0.472976 
 
 
-
 
NC_010622  Bphy_1975  two component LuxR family transcriptional regulator  55 
 
 		 293 aa  249  3e-65  Burkholderia phymatum STM815  Bacteria  normal  0.0150451  normal  1 
 
 
-
 
NC_010623  Bphy_5117  two component LuxR family transcriptional regulator  36.25 
 
 		 253 aa  129  6e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.180541 
 
 
-
 
NC_010676  Bphyt_4850  two component transcriptional regulator, LuxR family  34.39 
 
 		 257 aa  126  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0778424  normal  0.0399542 
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  34.69 
 
 		 249 aa  125  5e-28  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  30.91 
 
 		 224 aa  90.9  2e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  30.52 
 
 		 209 aa  89.7  4e-17  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  32.72 
 
 		 255 aa  88.2  1e-16  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  32.72 
 
 		 255 aa  88.2  1e-16  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  33.13 
 
 		 227 aa  88.2  1e-16  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  31.78 
 
 		 209 aa  85.9  7e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.18 
 
 		 224 aa  84  0.000000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  30.81 
 
 		 219 aa  81.6  0.00000000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  30.49 
 
 		 258 aa  80.5  0.00000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  31.05 
 
 		 227 aa  80.9  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  32.54 
 
 		 275 aa  79.7  0.00000000000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  28.7 
 
 		 227 aa  79.3  0.00000000000007  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  31.68 
 
 		 219 aa  78.2  0.0000000000001  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  30.73 
 
 		 221 aa  78.6  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  30.52 
 
 		 207 aa  78.2  0.0000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  31.4 
 
 		 216 aa  78.2  0.0000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_009972  Haur_4039  two component LuxR family transcriptional regulator  29.67 
 
 		 250 aa  77.4  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.512873  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  31.65 
 
 		 218 aa  78.2  0.0000000000002  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  34.46 
 
 		 215 aa  77.8  0.0000000000002  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  30.77 
 
 		 216 aa  77.8  0.0000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  30.32 
 
 		 232 aa  77.8  0.0000000000002  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  31.16 
 
 		 252 aa  77  0.0000000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  30.34 
 
 		 241 aa  76.3  0.0000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  30.25 
 
 		 218 aa  76.3  0.0000000000005  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  33.15 
 
 		 209 aa  75.9  0.0000000000007  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_009523  RoseRS_4323  two component LuxR family transcriptional regulator  28.9 
 
 		 246 aa  75.5  0.0000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.239635  normal  0.317944 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  34.12 
 
 		 221 aa  75.5  0.0000000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  29.15 
 
 		 215 aa  75.1  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  25.22 
 
 		 225 aa  74.7  0.000000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_009767  Rcas_4428  two component LuxR family transcriptional regulator  28.44 
 
 		 231 aa  74.3  0.000000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  32.92 
 
 		 222 aa  74.7  0.000000000002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  28.3 
 
 		 210 aa  73.6  0.000000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_5778  cyclic nucleotide-binding protein  30.81 
 
 		 353 aa  73.6  0.000000000003  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.714206 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  31.63 
 
 		 221 aa  73.6  0.000000000003  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  29.58 
 
 		 209 aa  73.2  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  28.38 
 
 		 201 aa  72.8  0.000000000005  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  28.51 
 
 		 209 aa  72.8  0.000000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  31.21 
 
 		 243 aa  72.8  0.000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  28.3 
 
 		 220 aa  72.4  0.000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  29.15 
 
 		 225 aa  72.4  0.000000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  26.73 
 
 		 212 aa  72  0.000000000009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  30.39 
 
 		 220 aa  72  0.000000000009  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  30.39 
 
 		 220 aa  72  0.000000000009  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  30.46 
 
 		 267 aa  71.6  0.00000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  29.83 
 
 		 220 aa  71.6  0.00000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  28.64 
 
 		 211 aa  72  0.00000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  28.51 
 
 		 213 aa  72  0.00000000001  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  29.38 
 
 		 214 aa  71.2  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  26.29 
 
 		 209 aa  70.9  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.31 
 
 		 208 aa  70.1  0.00000000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1738  two component transcriptional regulator, LuxR family  27.93 
 
 		 219 aa  70.5  0.00000000003  Ralstonia pickettii 12D  Bacteria  normal  0.0459515  normal  0.949758 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  26.98 
 
 		 218 aa  70.5  0.00000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  28.19 
 
 		 259 aa  70.5  0.00000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal  1 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  27.65 
 
 		 210 aa  69.7  0.00000000004  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_007204  Psyc_0602  nitrate/nitrite response regulator  26.7 
 
 		 219 aa  70.1  0.00000000004  Psychrobacter arcticus 273-4  Bacteria  normal  0.790372  normal  1 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  27.23 
 
 		 221 aa  70.1  0.00000000004  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  30.37 
 
 		 207 aa  70.1  0.00000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  32.91 
 
 		 216 aa  70.1  0.00000000004  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_2046  two component transcriptional regulator, LuxR family  28.12 
 
 		 219 aa  69.7  0.00000000005  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  27.23 
 
 		 220 aa  69.7  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  27.93 
 
 		 220 aa  69.3  0.00000000006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  28.96 
 
 		 219 aa  69.3  0.00000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  27.1 
 
 		 219 aa  68.9  0.00000000009  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  29.28 
 
 		 220 aa  68.9  0.00000000009  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  26.73 
 
 		 221 aa  68.2  0.0000000001  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  26.7 
 
 		 209 aa  68.2  0.0000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  28.21 
 
 		 239 aa  68.2  0.0000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  29.47 
 
 		 219 aa  68.2  0.0000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  29.56 
 
 		 220 aa  68.2  0.0000000001  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008322  Shewmr7_1222  two component LuxR family transcriptional regulator  28 
 
 		 225 aa  68.6  0.0000000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  29.09 
 
 		 223 aa  67.8  0.0000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  29 
 
 		 224 aa  67.8  0.0000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  30.05 
 
 		 220 aa  67.4  0.0000000002  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  30.59 
 
 		 221 aa  67.8  0.0000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  30.39 
 
 		 220 aa  68.2  0.0000000002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  24.88 
 
 		 214 aa  67.8  0.0000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  26.24 
 
 		 213 aa  67.8  0.0000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  29.87 
 
 		 258 aa  67.8  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.173155 
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  27.19 
 
 		 222 aa  67  0.0000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
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