More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_4608 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  100 
 
 
275 aa  561  1.0000000000000001e-159  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal 
 
 
-
 
NC_011371  Rleg2_6421  two component transcriptional regulator, LuxR family  38.81 
 
 
251 aa  156  3e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal 
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  38.43 
 
 
258 aa  153  2.9999999999999998e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.173155 
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  40.72 
 
 
255 aa  152  5e-36  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  40.72 
 
 
255 aa  152  5e-36  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  38.1 
 
 
259 aa  152  7e-36  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal 
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  39.45 
 
 
267 aa  151  1e-35  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  37.33 
 
 
351 aa  149  7e-35  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  38.81 
 
 
258 aa  148  1.0000000000000001e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  39.81 
 
 
253 aa  145  7.0000000000000006e-34  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  37.96 
 
 
342 aa  140  1.9999999999999998e-32  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_009428  Rsph17025_0978  two component LuxR family transcriptional regulator  35 
 
 
247 aa  133  1.9999999999999998e-30  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.159022  normal 
 
 
-
 
NC_009049  Rsph17029_1961  response regulator receiver protein  35 
 
 
247 aa  133  3.9999999999999996e-30  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_0316  LuxR family transcriptional regulator  34.86 
 
 
213 aa  130  2.0000000000000002e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.155222  n/a   
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  39.71 
 
 
241 aa  110  3e-23  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009050  Rsph17029_3701  two component LuxR family transcriptional regulator  31.47 
 
 
253 aa  106  5e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.567008  normal  0.770716 
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  33.19 
 
 
267 aa  98.6  9e-20  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3972  two component LuxR family transcriptional regulator  31.65 
 
 
251 aa  86.3  5e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.111106  n/a   
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  34.12 
 
 
243 aa  84.7  0.000000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  33.33 
 
 
227 aa  83.6  0.000000000000003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  37.5 
 
 
210 aa  80.9  0.00000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  35.25 
 
 
220 aa  81.3  0.00000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  34.04 
 
 
260 aa  80.1  0.00000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  28.44 
 
 
209 aa  80.5  0.00000000000003  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_009636  Smed_2837  response regulator receiver protein  28.86 
 
 
262 aa  80.5  0.00000000000003  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00000311945  normal  0.812847 
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  33.09 
 
 
219 aa  79.7  0.00000000000005  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  35.03 
 
 
245 aa  79.7  0.00000000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal 
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  33.09 
 
 
222 aa  79.3  0.00000000000006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
NC_010682  Rpic_1028  two component transcriptional regulator, LuxR family  33.09 
 
 
222 aa  78.2  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  0.146412  normal  0.260968 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  37.88 
 
 
216 aa  78.2  0.0000000000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  40.46 
 
 
224 aa  77.4  0.0000000000002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  34.51 
 
 
224 aa  77.4  0.0000000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  35.95 
 
 
224 aa  77  0.0000000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5547  two component LuxR family transcriptional regulator  33.14 
 
 
278 aa  76.3  0.0000000000005  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000595114  normal  0.307303 
 
 
-
 
NC_008060  Bcen_1607  two component LuxR family transcriptional regulator  34.12 
 
 
278 aa  76.3  0.0000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0202468  n/a   
 
 
-
 
NC_010508  Bcenmc03_2243  two component LuxR family transcriptional regulator  34.12 
 
 
278 aa  76.3  0.0000000000005  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000421268  normal 
 
 
-
 
NC_008542  Bcen2424_2219  two component LuxR family transcriptional regulator  34.12 
 
 
278 aa  76.3  0.0000000000005  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00895129  n/a   
 
 
-
 
NC_007651  BTH_I1094  DNA-binding response regulator  27.19 
 
 
279 aa  76.3  0.0000000000006  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000582737  n/a   
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  34.75 
 
 
227 aa  75.9  0.0000000000007  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.8 
 
 
208 aa  74.7  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009049  Rsph17029_1249  two component LuxR family transcriptional regulator  27.93 
 
 
235 aa  75.1  0.000000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  74.3  0.000000000002  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  74.3  0.000000000002  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  33.87 
 
 
220 aa  73.9  0.000000000002  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  74.3  0.000000000002  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  74.3  0.000000000002  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  73.9  0.000000000002  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  74.3  0.000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2591  two component LuxR family transcriptional regulator  27.93 
 
 
235 aa  73.6  0.000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211381  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  34.68 
 
 
217 aa  73.9  0.000000000003  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  29.86 
 
 
216 aa  73.2  0.000000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.192356 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  32.84 
 
 
218 aa  73.2  0.000000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  32.26 
 
 
220 aa  73.2  0.000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  35.25 
 
 
209 aa  73.2  0.000000000005  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_009428  Rsph17025_1932  two component LuxR family transcriptional regulator  27.88 
 
 
236 aa  73.2  0.000000000005  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  37.69 
 
 
215 aa  72.8  0.000000000005  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.104312 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  31.11 
 
 
221 aa  72.8  0.000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  32.19 
 
 
221 aa  72.8  0.000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  33.87 
 
 
220 aa  72.4  0.000000000007  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  30.15 
 
 
212 aa  72.4  0.000000000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2136  two component LuxR family transcriptional regulator  32.54 
 
 
276 aa  72.4  0.000000000008  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00080353  normal  0.948234 
 
 
-
 
NC_008390  Bamb_2257  two component LuxR family transcriptional regulator  32.54 
 
 
276 aa  72.4  0.000000000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.0303794  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  29.86 
 
 
216 aa  72  0.000000000009  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000136895 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  27.86 
 
 
211 aa  71.6  0.00000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  31.85 
 
 
219 aa  72  0.00000000001  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  33.08 
 
 
219 aa  71.6  0.00000000001  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  33.06 
 
 
220 aa  71.6  0.00000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  33.08 
 
 
238 aa  71.6  0.00000000001  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  29.33 
 
 
212 aa  71.6  0.00000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  35.92 
 
 
209 aa  71.2  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  26.95 
 
 
249 aa  71.2  0.00000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.172477 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  36.84 
 
 
214 aa  70.9  0.00000000002  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1379  two component transcriptional regulator, LuxR family  29.52 
 
 
292 aa  71.2  0.00000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0210202  hitchhiker  0.00446461 
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  32.59 
 
 
218 aa  71.2  0.00000000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  29.17 
 
 
216 aa  70.5  0.00000000003  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0994806 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  30.56 
 
 
215 aa  70.5  0.00000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  31.51 
 
 
215 aa  70.5  0.00000000003  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3372  two component LuxR family transcriptional regulator  28.91 
 
 
212 aa  70.5  0.00000000003  Opitutus terrae PB90-1  Bacteria  normal  normal  0.383896 
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  30.77 
 
 
219 aa  70.1  0.00000000003  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_4012  transcriptional regulator NarL  29.56 
 
 
214 aa  70.5  0.00000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_1975  two component LuxR family transcriptional regulator  29.17 
 
 
293 aa  70.5  0.00000000003  Burkholderia phymatum STM815  Bacteria  normal  0.0150451  normal 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  29.17 
 
 
216 aa  70.5  0.00000000003  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  34.04 
 
 
210 aa  70.5  0.00000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0620  two component transcriptional regulator, LuxR family protein  33.58 
 
 
209 aa  70.5  0.00000000003  Shewanella frigidimarina NCIMB 400  Bacteria  unclonable  0.000000000275655  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  29.88 
 
 
248 aa  70.1  0.00000000004  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  30.99 
 
 
215 aa  70.1  0.00000000004  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  33.87 
 
 
219 aa  70.1  0.00000000004  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  35.25 
 
 
218 aa  70.1  0.00000000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  35.46 
 
 
229 aa  69.7  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.190475 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  31.69 
 
 
221 aa  69.7  0.00000000004  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  32.54 
 
 
239 aa  69.7  0.00000000004  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  33.33 
 
 
218 aa  69.7  0.00000000004  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_007434  BURPS1710b_1471  DNA-binding response regulator  24.08 
 
 
363 aa  69.7  0.00000000005  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.0000000100474  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  30.37 
 
 
232 aa  69.7  0.00000000005  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  34.35 
 
 
216 aa  69.7  0.00000000005  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  34.04 
 
 
214 aa  69.3  0.00000000006  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_009076  BURPS1106A_1334  putative DNA-binding response regulator  26.39 
 
 
279 aa  69.3  0.00000000007  Burkholderia pseudomallei 1106a  Bacteria  normal  0.07086  n/a   
 
 
-
 
NC_009074  BURPS668_1325  putative DNA-binding response regulator  26.39 
 
 
279 aa  69.3  0.00000000007  Burkholderia pseudomallei 668  Bacteria  normal  0.0852238  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  29.17 
 
 
216 aa  69.3  0.00000000007  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000317123 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  32.37 
 
 
224 aa  68.9  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
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