More than 300 homologs were found in PanDaTox collection
for query gene Rsph17025_1932 on replicon NC_009428
Organism: Rhodobacter sphaeroides ATCC 17025



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009428  Rsph17025_1932  two component LuxR family transcriptional regulator  100 
 
 
236 aa  478  1e-134  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2591  two component LuxR family transcriptional regulator  92.37 
 
 
235 aa  441  1e-123  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211381  n/a   
 
 
-
 
NC_009049  Rsph17029_1249  two component LuxR family transcriptional regulator  92.37 
 
 
235 aa  441  1e-123  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  60.73 
 
 
236 aa  270  2e-71  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  42.86 
 
 
229 aa  184  9e-46  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  44.39 
 
 
226 aa  159  4e-38  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
NC_009049  Rsph17029_1528  two component LuxR family transcriptional regulator  44.39 
 
 
226 aa  158  6e-38  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal  0.0620794 
 
 
-
 
NC_009952  Dshi_2674  two component transcriptional regulator  43.4 
 
 
228 aa  157  1e-37  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00219271  normal 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  38.6 
 
 
239 aa  150  1e-35  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_009428  Rsph17025_1138  two component LuxR family transcriptional regulator  43.46 
 
 
226 aa  146  2.0000000000000003e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.914207  normal 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  38.73 
 
 
209 aa  135  7.000000000000001e-31  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  37.86 
 
 
216 aa  133  1.9999999999999998e-30  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.192356 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  38.54 
 
 
215 aa  133  1.9999999999999998e-30  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  38.28 
 
 
216 aa  132  3.9999999999999996e-30  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.00000000317123 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  39.42 
 
 
217 aa  132  6e-30  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  39.42 
 
 
217 aa  132  6e-30  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  38.28 
 
 
212 aa  132  6.999999999999999e-30  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  34.95 
 
 
215 aa  130  2.0000000000000002e-29  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  38.54 
 
 
215 aa  129  3e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  37.8 
 
 
216 aa  130  3e-29  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0994806 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  37.8 
 
 
216 aa  130  3e-29  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  37.38 
 
 
221 aa  127  1.0000000000000001e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  33.98 
 
 
224 aa  127  1.0000000000000001e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  33.8 
 
 
252 aa  126  3e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  35.44 
 
 
215 aa  126  3e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  35.41 
 
 
220 aa  126  3e-28  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  37.38 
 
 
221 aa  126  3e-28  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  35.89 
 
 
219 aa  125  4.0000000000000003e-28  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  36.36 
 
 
216 aa  125  5e-28  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.00000136895 
 
 
-
 
NC_011989  Avi_0584  two component response regulator  34.65 
 
 
215 aa  125  5e-28  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  36.45 
 
 
219 aa  125  7e-28  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal 
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  36.45 
 
 
211 aa  125  7e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  33.98 
 
 
221 aa  124  9e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  37.07 
 
 
215 aa  124  1e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  35.29 
 
 
238 aa  124  1e-27  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  35.92 
 
 
209 aa  123  2e-27  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  37.8 
 
 
221 aa  122  4e-27  Pseudomonas putida F1  Bacteria  normal  0.548338  normal 
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  36.59 
 
 
215 aa  122  5e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  37.8 
 
 
221 aa  122  6e-27  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  33.97 
 
 
221 aa  122  6e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  37.2 
 
 
221 aa  122  6e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  37.8 
 
 
221 aa  121  7e-27  Pseudomonas putida GB-1  Bacteria  normal  normal  0.892266 
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  35.75 
 
 
221 aa  120  1.9999999999999998e-26  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  34.47 
 
 
224 aa  120  1.9999999999999998e-26  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  38.28 
 
 
219 aa  120  1.9999999999999998e-26  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  37.02 
 
 
221 aa  120  3e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  34.6 
 
 
220 aa  119  3e-26  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  34.76 
 
 
220 aa  119  3.9999999999999996e-26  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  34.76 
 
 
220 aa  119  4.9999999999999996e-26  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  33.82 
 
 
220 aa  118  7.999999999999999e-26  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  34.95 
 
 
215 aa  117  9.999999999999999e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.463895 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  33.82 
 
 
223 aa  117  9.999999999999999e-26  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  34.58 
 
 
225 aa  117  9.999999999999999e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  34.31 
 
 
220 aa  117  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  33.01 
 
 
211 aa  117  1.9999999999999998e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  33.82 
 
 
223 aa  117  1.9999999999999998e-25  Shewanella sp. MR-4  Bacteria  normal  normal  0.335218 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  34.6 
 
 
222 aa  116  3e-25  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  33.82 
 
 
220 aa  116  3e-25  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  33.33 
 
 
224 aa  116  3e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  33.5 
 
 
224 aa  116  3e-25  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0588074 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  35.47 
 
 
209 aa  115  3.9999999999999997e-25  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  33.82 
 
 
220 aa  116  3.9999999999999997e-25  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  33.82 
 
 
219 aa  116  3.9999999999999997e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.001499 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  33.82 
 
 
220 aa  115  6.9999999999999995e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  33.82 
 
 
220 aa  115  6.9999999999999995e-25  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  33.5 
 
 
213 aa  115  7.999999999999999e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  32.85 
 
 
223 aa  115  7.999999999999999e-25  Shewanella sp. MR-7  Bacteria  normal  normal  0.358413 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  34.12 
 
 
220 aa  114  1.0000000000000001e-24  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  35.75 
 
 
222 aa  114  2.0000000000000002e-24  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  33.98 
 
 
213 aa  112  3e-24  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  32.52 
 
 
223 aa  113  3e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  33.98 
 
 
213 aa  113  3e-24  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  34.17 
 
 
244 aa  110  2.0000000000000002e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.89842 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  31.84 
 
 
241 aa  110  2.0000000000000002e-23  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0133592 
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  32.04 
 
 
209 aa  110  2.0000000000000002e-23  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  34.17 
 
 
244 aa  110  2.0000000000000002e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  31.4 
 
 
223 aa  110  2.0000000000000002e-23  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.211294 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  33.33 
 
 
219 aa  109  3e-23  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  33.33 
 
 
218 aa  109  4.0000000000000004e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  34.3 
 
 
218 aa  109  5e-23  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  36.27 
 
 
216 aa  108  5e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  34.48 
 
 
251 aa  108  6e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  33.17 
 
 
219 aa  108  9.000000000000001e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  33.66 
 
 
219 aa  107  2e-22  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  33.98 
 
 
214 aa  107  2e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  33.99 
 
 
251 aa  107  2e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  33.82 
 
 
209 aa  107  2e-22  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_003910  CPS_3420  LuxR family DNA-binding response regulator  32.54 
 
 
216 aa  106  3e-22  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  33.33 
 
 
210 aa  106  3e-22  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  26.73 
 
 
218 aa  106  3e-22  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  30.92 
 
 
227 aa  106  3e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  31.58 
 
 
214 aa  106  3e-22  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  33.33 
 
 
210 aa  106  4e-22  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  29.7 
 
 
218 aa  105  5e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  33.65 
 
 
216 aa  105  7e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal 
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  33.01 
 
 
231 aa  105  7e-22  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2334  two component transcriptional regulator, LuxR family  32.5 
 
 
221 aa  105  8e-22  Ralstonia pickettii 12D  Bacteria  normal  0.477601  normal  0.267999 
 
 
-
 
NC_010682  Rpic_2723  two component transcriptional regulator, LuxR family  32.5 
 
 
221 aa  105  8e-22  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_2536  two component transcriptional regulator, LuxR family protein  30.69 
 
 
216 aa  105  8e-22  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  33.5 
 
 
213 aa  104  9e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
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