Gene Rleg_6225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6225 
Symbol 
ID8016237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012852 
Strand
Start bp280763 
End bp281539 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID644827530 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_002978730 
Protein GI241258846 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.173155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCAG CACTTATACC GAATTTGGAC CTCAGGCAGG AGAACGTAGC TCTTCCCCTC 
AGGATAGATA ATCCGAACAC AGCTGTCGTG CCGGGAAGAC ACACGCATTC GCTTGTCATT
CTCGATAATC GTGAGCTTGA TCGGCAATGC CTGGCGCAAT GCATGGCTGC CCAAAAGGCG
GATTTGCAGA TTCTGGCATT TGGATCAATT GAGGAGTGGA AGCAGAAGCG CGACGAATAT
CCTCCGCTTT CGGCAATCCT CTTGAACGTC GGCGGCAAAA AGATCGATGA ACCGGCCGTT
TCGGAGCAAA TCCGGAAGCT TTCGTCAGAA TTTGTATCAA CGCCACTCAT CGTATTGGCC
GATAGCGACG ATTTCGGCCA AATCGTTAGG GCACTTGAGT ACGGAGCCAA AGGGTTCATC
CCCGCCTCAG TCAGCGTCAG TGTCTGTATG GAGCTGATCG CGCTGTCGGT GGCAGGAGGA
ATTTTTGTGC CTGCAAGCGC CCTGTTCGCC ATGCGTCATT TGCTGGACTC GAGCAATTCG
ACCGCACGCC CGCTAGCCGG CATATTCACG GATCGTCAGG TCGAAGTCGT GGAGGCGCTC
CGACGCGGAA AGGCAAACAA AATTATCGCT TATGAGCTCA ACCTGCGAGA AAGCACTGTA
AAGGTGCATG TTCGCAATAT TATGAAAAAG GTCAAAGCGA CGAACAGAAC GGAAGTCGTG
TTCAAGCTCA ACGATCTGTT TCTTTCGGGC GGCTCTGCGA CAAACAGCCT GTGCTGA
 
Protein sequence
MNSALIPNLD LRQENVALPL RIDNPNTAVV PGRHTHSLVI LDNRELDRQC LAQCMAAQKA 
DLQILAFGSI EEWKQKRDEY PPLSAILLNV GGKKIDEPAV SEQIRKLSSE FVSTPLIVLA
DSDDFGQIVR ALEYGAKGFI PASVSVSVCM ELIALSVAGG IFVPASALFA MRHLLDSSNS
TARPLAGIFT DRQVEVVEAL RRGKANKIIA YELNLRESTV KVHVRNIMKK VKATNRTEVV
FKLNDLFLSG GSATNSLC