| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4826 |
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| Symbol | |
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| ID | 5318959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 1343016 |
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| End bp | 1343819 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640776614 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001313546 |
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| Protein GI | 150376950 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.847801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0520322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCAT TGACTCGAAT TCACGAAAAT GCCGCGCTCG AAGTACATAG GCTGAGCTCA
TCCGGTCCTG GTAAGGCAAC TAGTGAAACG CATAACAACA CGGCAGCAAG CTCGGCTCTG
CTCCTGTTGG ACAACCGAAC GCTCGATAGG GAATGCCTCT CCCAGTGTCT CGTGCTGCAT
GGTATGGGCA TGCAAGTCTT AGCCTATGGT TCAATTGATG AATGGCGGAA GGATAAAGAA
CTTCATCCGC CCATCGCGGC AATCCTGTTG AACATCGGTG GTCGAAAGGC TGTCGATACC
AGCAATGCGG CCGAAATCTC GGATCTGGTA AGGGAATTTG ACCCGACCCC CGTCGTTCTC
CTATCCGATT GGGATGAACT GCCTCAAATC CTCAGGGCAC TCGAGTGTGG GGTCAGGGGC
TATATACCAT CCTCGATCGG CTTTGACGTC TGTGTGCAAG CCGTCAATCT GGCGCGAGCC
GGCGGGATAT TCGTCCCCGC CAGCAGCGTC CTGACCACAC GAATTGACAT TGTCGCTGGC
GGGGAGGTGT CACGGCCCAT GACAGGGATG TTCACGCAGC GCCAGGAAGA AGTCATCCAA
GCGCTGAGGC GCGGCAAGGC GAACAAGATC ATTGCCTACG AGCTCAATCT GCGTGAGAGC
ACGGTAAAAG TCCACATCCG GAACATCATG AAAAAGCTGA AGGCTACGAA CCGGACTGAG
GTCGCTTACA AGCTCAGCGA TATGTTCGTC GCCGAGGGCG GAGCACGGGA CAAGCCGGGA
CTGCCGCAAT CAGGATCCTG TTAA
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| Protein sequence | MHSLTRIHEN AALEVHRLSS SGPGKATSET HNNTAASSAL LLLDNRTLDR ECLSQCLVLH
GMGMQVLAYG SIDEWRKDKE LHPPIAAILL NIGGRKAVDT SNAAEISDLV REFDPTPVVL
LSDWDELPQI LRALECGVRG YIPSSIGFDV CVQAVNLARA GGIFVPASSV LTTRIDIVAG
GEVSRPMTGM FTQRQEEVIQ ALRRGKANKI IAYELNLRES TVKVHIRNIM KKLKATNRTE
VAYKLSDMFV AEGGARDKPG LPQSGSC
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