More than 300 homologs were found in PanDaTox collection
for query gene Oant_3972 on replicon NC_009668
Organism: Ochrobactrum anthropi ATCC 49188



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009668  Oant_3972  two component LuxR family transcriptional regulator  100 
 
 		 251 aa  514  1.0000000000000001e-145  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.111106  n/a   
 
 
-
 
NC_011369  Rleg2_0250  two component transcriptional regulator, LuxR family  48 
 
 		 260 aa  210  2e-53  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.664516  normal  1 
 
 
-
 
NC_012850  Rleg_0280  two component transcriptional regulator, LuxR family  49.56 
 
 		 245 aa  207  1e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.417338  normal  1 
 
 
-
 
NC_012852  Rleg_6225  two component transcriptional regulator, LuxR family  30.29 
 
 		 258 aa  108  1e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.173155 
 
 
-
 
NC_011371  Rleg2_6421  two component transcriptional regulator, LuxR family  28.14 
 
 		 251 aa  101  9e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.872179  normal  1 
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  30.77 
 
 		 267 aa  95.9  5e-19  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  27.39 
 
 		 255 aa  92.8  5e-18  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  27.39 
 
 		 255 aa  92.8  5e-18  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  30.13 
 
 		 227 aa  92  7e-18  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  27.73 
 
 		 253 aa  90.1  3e-17  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  31.03 
 
 		 351 aa  89.4  5e-17  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
NC_009620  Smed_4801  two component LuxR family transcriptional regulator  26.64 
 
 		 259 aa  88.6  9e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.433912  normal  1 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  28.73 
 
 		 258 aa  87.4  2e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  29.82 
 
 		 342 aa  86.7  3e-16  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_010505  Mrad2831_4608  two component LuxR family transcriptional regulator  31.65 
 
 		 275 aa  87  3e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.313635  normal  1 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  29.57 
 
 		 243 aa  85.5  7e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  30.26 
 
 		 227 aa  80.5  0.00000000000002  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_009049  Rsph17029_1961  response regulator receiver protein  28.26 
 
 		 247 aa  79.7  0.00000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009667  Oant_0267  two component LuxR family transcriptional regulator  26.55 
 
 		 241 aa  79.3  0.00000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  29.91 
 
 		 201 aa  78.6  0.0000000000001  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.88 
 
 		 208 aa  77  0.0000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_0978  two component LuxR family transcriptional regulator  29.13 
 
 		 247 aa  76.6  0.0000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.159022  normal  1 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  28.57 
 
 		 238 aa  75.9  0.0000000000006  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  28.38 
 
 		 232 aa  75.5  0.0000000000009  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_011369  Rleg2_3999  transcriptional regulator, LuxR family  26.52 
 
 		 260 aa  74.3  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0000000117104  normal  1 
 
 
-
 
NC_007493  RSP_0316  LuxR family transcriptional regulator  28 
 
 		 213 aa  73.9  0.000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.155222  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  26.34 
 
 		 221 aa  73.6  0.000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  27.68 
 
 		 221 aa  72.8  0.000000000005  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  27.23 
 
 		 221 aa  72.4  0.000000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  28.38 
 
 		 219 aa  72.4  0.000000000006  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  27.56 
 
 		 219 aa  72  0.000000000008  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_4328  transcriptional regulator, LuxR family  26.67 
 
 		 260 aa  72  0.000000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00000000127099  normal  0.0225245 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  29.91 
 
 		 213 aa  71.6  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  29.63 
 
 		 216 aa  71.2  0.00000000001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET1531  LuxR family DNA-binding response regulator  29 
 
 		 219 aa  71.2  0.00000000002  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000956559  n/a   
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  27.68 
 
 		 222 aa  70.5  0.00000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  30.84 
 
 		 223 aa  70.5  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  28.44 
 
 		 218 aa  70.5  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_013173  Dbac_2905  transcriptional regulator, LuxR family  30.16 
 
 		 335 aa  70.9  0.00000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  27.15 
 
 		 214 aa  70.5  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_013552  DhcVS_1373  DNA-binding response regulator, LuxR family  25.82 
 
 		 238 aa  71.2  0.00000000002  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  28.44 
 
 		 218 aa  70.5  0.00000000002  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  27.11 
 
 		 214 aa  70.1  0.00000000003  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  27.11 
 
 		 214 aa  70.1  0.00000000003  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_4816  response regulator receiver protein  26.47 
 
 		 248 aa  70.1  0.00000000004  Sinorhizobium medicae WSM419  Bacteria  normal  0.890736  normal  0.794324 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  30.09 
 
 		 217 aa  70.1  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  27.63 
 
 		 218 aa  70.1  0.00000000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  26.67 
 
 		 216 aa  69.3  0.00000000005  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_010682  Rpic_1028  two component transcriptional regulator, LuxR family  27.68 
 
 		 222 aa  69.7  0.00000000005  Ralstonia pickettii 12J  Bacteria  normal  0.146412  normal  0.260968 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  28.32 
 
 		 219 aa  69.3  0.00000000006  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  28.21 
 
 		 220 aa  68.9  0.00000000007  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008009  Acid345_0972  two component LuxR family transcriptional regulator  30.9 
 
 		 227 aa  68.9  0.00000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.299836  normal  0.0302219 
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  24.77 
 
 		 204 aa  68.9  0.00000000007  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  27.11 
 
 		 218 aa  68.9  0.00000000007  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  29.6 
 
 		 206 aa  68.9  0.00000000008  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  28.12 
 
 		 221 aa  68.6  0.00000000009  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  29.07 
 
 		 251 aa  68.2  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  26.22 
 
 		 216 aa  68.6  0.0000000001  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  28.89 
 
 		 221 aa  67.8  0.0000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  27.56 
 
 		 223 aa  68.2  0.0000000001  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.11 
 
 		 222 aa  67.8  0.0000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  28.7 
 
 		 209 aa  68.2  0.0000000001  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  27.11 
 
 		 216 aa  68.2  0.0000000001  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  27.56 
 
 		 223 aa  68.2  0.0000000001  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  29.07 
 
 		 219 aa  68.2  0.0000000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  30.63 
 
 		 219 aa  68.2  0.0000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  27.35 
 
 		 214 aa  68.6  0.0000000001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  29.2 
 
 		 220 aa  68.6  0.0000000001  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  28.44 
 
 		 219 aa  68.2  0.0000000001  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  27.78 
 
 		 220 aa  68.2  0.0000000001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.02 
 
 		 224 aa  67.4  0.0000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  27 
 
 		 221 aa  67.4  0.0000000002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  29.3 
 
 		 209 aa  67.4  0.0000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  30.18 
 
 		 229 aa  67.4  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  28.12 
 
 		 222 aa  67.4  0.0000000002  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  28.63 
 
 		 220 aa  66.6  0.0000000003  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  26.92 
 
 		 217 aa  67  0.0000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  27.9 
 
 		 220 aa  67  0.0000000003  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  25.68 
 
 		 227 aa  67  0.0000000003  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  26.92 
 
 		 217 aa  67  0.0000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  27.04 
 
 		 215 aa  66.6  0.0000000004  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  29.07 
 
 		 220 aa  66.2  0.0000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  27.31 
 
 		 216 aa  66.6  0.0000000004  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  29.07 
 
 		 220 aa  66.2  0.0000000004  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  27.4 
 
 		 228 aa  66.6  0.0000000004  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  29.3 
 
 		 217 aa  66.6  0.0000000004  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  28.63 
 
 		 220 aa  66.2  0.0000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  27.31 
 
 		 251 aa  66.2  0.0000000005  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_010681  Bphyt_2130  two component transcriptional regulator, LuxR family  24.58 
 
 		 239 aa  66.2  0.0000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  28.32 
 
 		 228 aa  66.2  0.0000000005  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  34.4 
 
 		 267 aa  65.9  0.0000000006  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  26.22 
 
 		 212 aa  65.5  0.0000000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  26.22 
 
 		 215 aa  65.5  0.0000000008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  27.75 
 
 		 209 aa  65.5  0.0000000008  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  29.13 
 
 		 229 aa  65.5  0.0000000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  28.7 
 
 		 219 aa  65.5  0.0000000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  29.63 
 
 		 248 aa  65.5  0.0000000009  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  29.9 
 
 		 215 aa  65.5  0.0000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  28.12 
 
 		 212 aa  65.1  0.0000000009  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  26.09 
 
 		 214 aa  65.1  0.000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
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