More than 300 homologs were found in PanDaTox collection
for query gene DhcVS_1373 on replicon NC_013552
Organism: Dehalococcoides sp. VS



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013552  DhcVS_1373  DNA-binding response regulator, LuxR family  100 
 
 
238 aa  487  1e-137  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0092  LuxR family DNA-binding response regulator  60.87 
 
 
236 aa  282  3.0000000000000004e-75  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1561  LuxR family DNA-binding response regulator  41.31 
 
 
226 aa  156  2e-37  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.0012725  n/a   
 
 
-
 
NC_009455  DehaBAV1_0974  two component LuxR family transcriptional regulator  37.97 
 
 
247 aa  149  5e-35  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00000126323  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  36.92 
 
 
219 aa  140  9.999999999999999e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal 
 
 
-
 
NC_013159  Svir_32780  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  36.7 
 
 
216 aa  141  9.999999999999999e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4942  two component transcriptional regulator, LuxR family  35.09 
 
 
222 aa  140  9.999999999999999e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_1318  DNA-binding response regulator, LuxR family  36.19 
 
 
222 aa  140  1.9999999999999998e-32  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  32.88 
 
 
229 aa  140  1.9999999999999998e-32  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1144  DNA-binding response regulator  34.31 
 
 
247 aa  139  3e-32  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0295  two component LuxR family transcriptional regulator  32.76 
 
 
243 aa  139  3e-32  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  35.32 
 
 
219 aa  139  3.9999999999999997e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.33 
 
 
218 aa  139  4.999999999999999e-32  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  40.83 
 
 
215 aa  139  4.999999999999999e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_91  DNA-binding response regulator, LuxR family  32.33 
 
 
243 aa  138  6e-32  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  34.19 
 
 
239 aa  137  1e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  35.29 
 
 
215 aa  136  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0769384 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  40.37 
 
 
215 aa  137  2e-31  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  39.45 
 
 
215 aa  136  3.0000000000000003e-31  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  37.27 
 
 
230 aa  136  3.0000000000000003e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  39.45 
 
 
215 aa  135  4e-31  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  39.91 
 
 
215 aa  135  6.0000000000000005e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  38.39 
 
 
224 aa  135  6.0000000000000005e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  33.48 
 
 
228 aa  135  8e-31  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  33.33 
 
 
231 aa  134  9.999999999999999e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET1531  LuxR family DNA-binding response regulator  39.07 
 
 
219 aa  133  1.9999999999999998e-30  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.000956559  n/a   
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  30.36 
 
 
232 aa  133  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  35.32 
 
 
220 aa  133  3e-30  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.53 
 
 
226 aa  132  3.9999999999999996e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.65 
 
 
214 aa  132  3.9999999999999996e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  34.48 
 
 
250 aa  132  3.9999999999999996e-30  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  36.84 
 
 
226 aa  132  6.999999999999999e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  33.63 
 
 
231 aa  131  6.999999999999999e-30  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  33.49 
 
 
218 aa  131  7.999999999999999e-30  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  35.16 
 
 
212 aa  131  9e-30  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_013235  Namu_2003  two component transcriptional regulator, LuxR family  33.8 
 
 
219 aa  131  9e-30  Nakamurella multipartita DSM 44233  Bacteria  normal  0.183245  hitchhiker  0.00373502 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  32.61 
 
 
218 aa  131  1.0000000000000001e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  35.71 
 
 
226 aa  130  1.0000000000000001e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  31.48 
 
 
219 aa  130  2.0000000000000002e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_007333  Tfu_2233  LuxR response regulator receiver  31.58 
 
 
228 aa  130  2.0000000000000002e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  34.4 
 
 
238 aa  130  2.0000000000000002e-29  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  33.94 
 
 
214 aa  130  2.0000000000000002e-29  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  32.89 
 
 
230 aa  130  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.455968 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  33.48 
 
 
223 aa  129  3e-29  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0556432 
 
 
-
 
NC_013159  Svir_22850  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.19 
 
 
239 aa  129  4.0000000000000003e-29  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.711047 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  30.41 
 
 
220 aa  129  4.0000000000000003e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.81 
 
 
217 aa  129  5.0000000000000004e-29  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013093  Amir_2737  two component transcriptional regulator, LuxR family  36.04 
 
 
227 aa  129  5.0000000000000004e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.418014  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  34.36 
 
 
227 aa  129  5.0000000000000004e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  34.56 
 
 
221 aa  128  6e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0190  two component transcriptional regulator, LuxR family  34.56 
 
 
219 aa  128  6e-29  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.146862  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  32.29 
 
 
226 aa  128  7.000000000000001e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_007777  Francci3_2258  two component LuxR family transcriptional regulator  35.65 
 
 
224 aa  128  7.000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  0.124896  normal  0.0124728 
 
 
-
 
NC_008148  Rxyl_2511  two component LuxR family transcriptional regulator  32.88 
 
 
229 aa  128  7.000000000000001e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  34.4 
 
 
216 aa  128  8.000000000000001e-29  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  35.16 
 
 
218 aa  128  8.000000000000001e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  34.86 
 
 
222 aa  128  8.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_007333  Tfu_1845  LuxR response regulator receiver  34.7 
 
 
215 aa  127  1.0000000000000001e-28  Thermobifida fusca YX  Bacteria  hitchhiker  0.00433344  n/a   
 
 
-
 
NC_007333  Tfu_2950  LuxR response regulator receiver  35.56 
 
 
221 aa  127  1.0000000000000001e-28  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1487  two component LuxR family transcriptional regulator  33.04 
 
 
231 aa  127  1.0000000000000001e-28  Frankia sp. CcI3  Bacteria  normal  0.0122618  normal  0.753042 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  33.94 
 
 
217 aa  127  1.0000000000000001e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  31.76 
 
 
230 aa  127  1.0000000000000001e-28  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  34.7 
 
 
220 aa  127  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  30.73 
 
 
209 aa  127  1.0000000000000001e-28  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.7 
 
 
221 aa  126  2.0000000000000002e-28  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  32.87 
 
 
222 aa  127  2.0000000000000002e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
NC_014151  Cfla_0648  two component transcriptional regulator, LuxR family  31.65 
 
 
211 aa  126  3e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0377209  hitchhiker  0.00104431 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.25 
 
 
222 aa  126  3e-28  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.56 
 
 
221 aa  126  4.0000000000000003e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.133182 
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  35.29 
 
 
207 aa  125  4.0000000000000003e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_1873  two component transcriptional regulator, LuxR family  33.33 
 
 
233 aa  125  4.0000000000000003e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  0.145213  normal  0.385799 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  34.22 
 
 
225 aa  125  5e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  32.88 
 
 
218 aa  125  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  34.42 
 
 
221 aa  125  5e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  32.16 
 
 
226 aa  125  6e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  33.49 
 
 
215 aa  125  6e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  31.65 
 
 
239 aa  125  7e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  35.94 
 
 
224 aa  125  7e-28  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  34.84 
 
 
230 aa  125  7e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011988  Avi_5384  two component response regulator  33.79 
 
 
216 aa  125  8.000000000000001e-28  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8900  two component transcriptional regulator, LuxR family  32.27 
 
 
221 aa  125  8.000000000000001e-28  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.967084  normal 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  32.6 
 
 
226 aa  125  8.000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013093  Amir_2010  two component transcriptional regulator, LuxR family  31.63 
 
 
214 aa  125  8.000000000000001e-28  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  32.13 
 
 
221 aa  124  9e-28  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  31.84 
 
 
241 aa  124  9e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  35.48 
 
 
224 aa  124  1e-27  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  33.94 
 
 
224 aa  124  1e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  32.6 
 
 
230 aa  124  1e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  35.48 
 
 
224 aa  124  2e-27  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  33.82 
 
 
206 aa  124  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  32.42 
 
 
214 aa  124  2e-27  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  32.88 
 
 
207 aa  123  2e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3097  two component transcriptional regulator, LuxR family  33.33 
 
 
222 aa  124  2e-27  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.472018  normal  0.507317 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  30.73 
 
 
212 aa  123  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  32.11 
 
 
216 aa  124  2e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>