| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0974 |
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| Symbol | |
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| ID | 5132172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 961357 |
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| End bp | 962100 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640529898 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001214432 |
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| Protein GI | 147669614 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000126323 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACAAAA TAATCATGAA ACCCAACAAA TCCTCTCCCA AGATAGGGCA TTGCACTTCT
CCAGTCAGGA TATTTTTGGC GGATGACCAC CAAGTTGCCA GAGAAGGGCT GCGAAAGGTA
CTCTGTTCCG AAGCAGATAT TGAAATAGTG GGGGAGGCTG ATAACGCTTC AGATGTACTT
AGGCTAGTAG AAGAACTAAA ACCGCAGGTT GTGTTAACGG ATATCAAAAT ATCCGGCCTT
GACAGTTGTG AGCTGAGCCA TAAGCTAAAA GGGGTATATC CTCCGGTCAA GGTTGTATTC
CTGACCGGTT ATGAAGCAGA ACCATATGTA GCAGAGGCAT TGTATAACGG CATAAATGGC
TTTTTAACCA AGGACTGTCC GCTTGAACTT CTATCCAATG CTATCAGGGT AGTAGCTTGC
GGTGGCAGCG TCTGGCAGGG GGATTTGCTT GAAAGTGTCT CTAAAAACCT TGTTAAGTTT
GTAAATACCA AGGCTGAAGG CCGAAGTCCT GCCGGTGAAT ATTCGTCAGC TACTGTCAAT
GTTATACCTC AGGATGTACT TTCTCCGCGT GAACTTGAGA TACTTATTAT GGTGGCACGC
GGTTATACCA ATAAGGAAAT CAGCGTTAAT TTGGATTATG CTGAAATTAC AATCAAGAAA
TATGTAAAAG GTATTATGAC CAAGCTTAAT GTCTCTAACC GGACTCTGGC AGGCATTGCG
GCTGCCAAAT TTGGTCTTGT TTAG
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| Protein sequence | MDKIIMKPNK SSPKIGHCTS PVRIFLADDH QVAREGLRKV LCSEADIEIV GEADNASDVL
RLVEELKPQV VLTDIKISGL DSCELSHKLK GVYPPVKVVF LTGYEAEPYV AEALYNGING
FLTKDCPLEL LSNAIRVVAC GGSVWQGDLL ESVSKNLVKF VNTKAEGRSP AGEYSSATVN
VIPQDVLSPR ELEILIMVAR GYTNKEISVN LDYAEITIKK YVKGIMTKLN VSNRTLAGIA
AAKFGLV
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