| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1561 |
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| Symbol | |
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| ID | 3229163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1407133 |
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| End bp | 1407813 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637121119 |
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| Product | LuxR family DNA-binding response regulator |
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| Protein accession | YP_182258 |
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| Protein GI | 57233700 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0012725 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGGAATT TATCAGACAA TATACGTAAC CCAATCAGAA TATTTATTGT TGATGACCAT
GAAATAGTGA GACAAGGCCT TAAAGTCATT ATTAATCAAG AACAGGACTT TGAATTAGTA
GGTGAATCAA ATGGACAAAA AGGACTCCTG AAGGAAATTG CTGAAGCTCA TCCGGATGTA
TTATTACTGG ACATAAGGAT TAGTGGTTCA GATGGATTTG ATATTGCTTC ACAGCTTAAT
GAAAAGTTTC CTTCCATAAA AATTCTGATA ATTTCCGGAT ATGAAAGTGA ATTGTATTTA
GTTGAGGCAT TAGATCATAA GGTTAGCGGA TTTATACCGA AGGGGTCTTC GCGAGATTAT
GTTTGTTCAG CGATTCGCAT GGTTGCTCTT GGTGGTACAG TTTGGCACGG AGAGCTATTG
TACAGAGTTA TCAGGGGGTT GAGTAGACTA GGGAATGAAC CTAATGATAC AAAAGTACAA
ATAGGGAAAA GCCATTTAAA ACCTCGCGAA TTAAAAGTAC TATCATTATT GGCCAAAGGG
AAGTTAAACA AAGAAATATG CTTCGAACTA CAGATATCGA TGGATACTGT TAAAAAAGAT
ATACATCAGT TAAAAAGTAA ATACGGAGTG TTTAATCGTA CTCAACTTGC TACTATAGCA
ACTGAGATGC AATTAAAGTA A
|
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| Protein sequence | MGNLSDNIRN PIRIFIVDDH EIVRQGLKVI INQEQDFELV GESNGQKGLL KEIAEAHPDV
LLLDIRISGS DGFDIASQLN EKFPSIKILI ISGYESELYL VEALDHKVSG FIPKGSSRDY
VCSAIRMVAL GGTVWHGELL YRVIRGLSRL GNEPNDTKVQ IGKSHLKPRE LKVLSLLAKG
KLNKEICFEL QISMDTVKKD IHQLKSKYGV FNRTQLATIA TEMQLK
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