| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0092 |
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| Symbol | |
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| ID | 3229005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 88814 |
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| End bp | 89524 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637119661 |
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| Product | LuxR family DNA-binding response regulator |
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| Protein accession | YP_180843 |
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| Protein GI | 57233544 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAACCC TAGATTGTCC TAATAAGATT GATACAAACC TAGACGGCTA CATTATAAGC
GTTGTCATAA TAGATGATCA TGAAATAGTA CGGCAGGGCT TGATGGCTAT GCTCAGGCGG
GAAGATGGGC TTTGCCTGGT CGGTGATGCA TCTGATGCTG TTACCGGACT AAAGTTGATT
GATGCTACCA ATCCGGATGT AGTTTTGCTG GATATACAGC TAAATAATTC GGATATGGAC
GGATTTTCGC TGGCGAAACA GATTAAGAGT AAATCACCGG ATAAAATAGT AATAATGCTG
ACTGGTTTTG ATTCGGCGCT TTACTTGATA GAATCACTCA GAACTAGACT GGATGGGTTC
GTTCTAAAGG AGCAATCCGG CGCTATCATA GCCGGTGCAA TTAGAATGGC ATATGCGGGT
GTAGGCGCTT GGGATACACG GATTTTGCAC CGGGCACTTG TAAACCGGCT GAAAGCGCAT
ACCGGGGACA CTATTGATAA TTTAGGTATT AAGGCTGATA TAGACCTTAA TGATAAAGAA
CGGATGGTTT TCAATCTTCT GGCGCGGGGG TATTCAAATA AAGACATTGA AAGTACGTTA
AAATATACTG CCAGTACAGT CAAAAAATAT GTGTACACCT GTATGAAAAA ATTCGGGGTT
TCCAACCGCA CGCAATTGGC TCTTATAGCT AACAGTACCG GAGTAAAATA A
|
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| Protein sequence | METLDCPNKI DTNLDGYIIS VVIIDDHEIV RQGLMAMLRR EDGLCLVGDA SDAVTGLKLI
DATNPDVVLL DIQLNNSDMD GFSLAKQIKS KSPDKIVIML TGFDSALYLI ESLRTRLDGF
VLKEQSGAII AGAIRMAYAG VGAWDTRILH RALVNRLKAH TGDTIDNLGI KADIDLNDKE
RMVFNLLARG YSNKDIESTL KYTASTVKKY VYTCMKKFGV SNRTQLALIA NSTGVK
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