Gene DhcVS_1373 details

Gene Information

• Locus tag: DhcVS_1373
• Symbol: rdhD
• ID: 8658298
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1270581
• End bp: 1271297
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 41%
• Product: DNA-binding response regulator, LuxR family
• Protein accession: YP_003330800
• Protein GI: 270308742

Plasmid Coverage information

• Num covering plasmid clones: 45
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGCC AGGAAAATAC AAACCAAAAA CCCGCTGCAA ACTCTGCCGG ACAGACAATC 
AAAGTGGTAT TGATAGATGA TCATGAGATA GTACGGCAGG GGCTTGCCAC TATGCTCCAA 
AAGGAAGCAG ATATCTGCCT GGTCGGCGAT GCATCTGACT CAAGCAGCGG TTTAGATATC 
ATTGAAAAAA CCAATCCGGA TGTGGTCTTG CTGGATATCC AGCTTGGCAA TTCGGATATT 
GACGGGTTTG CCCTGGCTAA AAAAATCAAA AGTAAATCCC CGAATAGGGT AGTAATTATG 
CTTACGGGGT TTGATTCTGA ACTATATTTA ACCGAAGCAC TAAAAAGCAA GGTTAACGGG 
TTCATTCTCA AAGAACACCC CAGATTGATT CTGGCCTGCG CTATAAGAAT GGCTTATTCG 
GGCATAAGTA TCTGGGACAC CAAGATTCTG TACAGGGCAT TGACCAATAT TTCAAAACCG 
AAGGAAGAAA TTGCAGATGC TCCATTGGTA CATAAAAAAT TCGGCACAGA TTTAACTGAC 
AGAGAGAGGA CAATCTTAAA TCTTCTGGCA AAGGGATATT CCAACAAGGA TATCGGGCAG 
AAACTGGATT ATACTCAGAC AACCGTTAAG AAGTATGTTT ATAATTGTAT GAAAAAATTG 
GGAGTTTCAA ACAGAACCCA ACTGGCTATT TTAGCTAATA ATAATGGCCT GCAGTAA 

 

Protein sequence

MYSQENTNQK PAANSAGQTI KVVLIDDHEI VRQGLATMLQ KEADICLVGD ASDSSSGLDI 
IEKTNPDVVL LDIQLGNSDI DGFALAKKIK SKSPNRVVIM LTGFDSELYL TEALKSKVNG 
FILKEHPRLI LACAIRMAYS GISIWDTKIL YRALTNISKP KEEIADAPLV HKKFGTDLTD 
RERTILNLLA KGYSNKDIGQ KLDYTQTTVK KYVYNCMKKL GVSNRTQLAI LANNNGLQ