| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4801 |
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| Symbol | |
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| ID | 5319030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1319691 |
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| End bp | 1320470 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640776595 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001313527 |
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| Protein GI | 150376931 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.433912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGG ACATGATTGG TGAGAACGAA ATAAACCACG ACAGAATTGA TCATATTGTG
GCGGCTAGAG ATAGCGCAGG AGCAACTGAC AATCACGAAC GCCTGCTCGT GATCATCGAT
AGTCGCGCAC TTGACCGCCA ATGTCTCGCG CAGAGCATCA TCGCTCACAA CATGGATATG
CAGGTCTTAG CGTTAGGAAC GATGGTGGAC TGGGGTCAGC ATCGCAACAA CTACCCAGCG
CCCTCTGCAA TTTTGCTGAA TGTCGGAGCG AGAAGGATCG CTGAGCCTTT CATCACCGCG
GAAATTCGAG AACTGTCGTC CGAGTTCGCA ACAACACCGG TTATCGTACT GGCAGATACG
GATGAGCTTG CGCAGGTCGT GAAGGCACTC GAGTATGGAG CCAAGGGCTA CATTCCTTCT
TCCGTCAGCA TAGATGTCTG CATCGAAGCA ATTGGCCTTG CGCTGGCGGG CGGAATTTTT
GTTCCCGCCA GCAGCATCTT AGCGATGGGC CGGCTATTGG AGACTGGTAA CGCCGTCGCG
CACCCTCTGG CTGGTATGTT CACAGCTCGC CAAGCCGAAG TGGTCGAGGC TCTGCGGCGC
GGCAAGGCAA ACAAGATCAT TGCATATGAG CTCAATCTAC GGGAAAGCAC CGTCAAAGTT
CACATCCGCA ACATCATGAA GAAGGTCAAG GCCACGAACA GAACCGAAGT TGCCTTCAAG
ATCAATGATC TCTTTCCGGC TGATACTCCG GTCGATGGAA CGAATTGGCT CGACCCGTGA
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| Protein sequence | MASDMIGENE INHDRIDHIV AARDSAGATD NHERLLVIID SRALDRQCLA QSIIAHNMDM
QVLALGTMVD WGQHRNNYPA PSAILLNVGA RRIAEPFITA EIRELSSEFA TTPVIVLADT
DELAQVVKAL EYGAKGYIPS SVSIDVCIEA IGLALAGGIF VPASSILAMG RLLETGNAVA
HPLAGMFTAR QAEVVEALRR GKANKIIAYE LNLRESTVKV HIRNIMKKVK ATNRTEVAFK
INDLFPADTP VDGTNWLDP
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