| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1690 |
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| Symbol | |
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| ID | 5455400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1826026 |
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| End bp | 1826673 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640877265 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001412966 |
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| Protein GI | 154252142 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.104312 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATAC TCGTGACCGG AGAGCAGCCG ATTTTCTGCG AGGGGCTTTC ATCCATAGTG
AACCGGCTTT ACGCCGGAGC GACCGTCAGG GTGGTGGCGG GACCCCGCTC TCTTTCGGGG
CTTGATGTGG GCACGGCCGA GCTGGTCCTG CTGGATATCG GCGCGGGGCA GGCGCCATCA
GGCGCCGATT TGCTGAGCGA CTTCGTCTCG CGGACCGAGG CAAAGGTCGT CGTCTTCAGC
GACCGCAGCG CGCCTGGTTA CATCCGTCAG GTGATGGATC TCGGTGTTGC CGGCTTCGTA
CCGAAGACGA TCGGCGTGAC GCTGGTAGAG AGCGCGCTTC GCCTCATCGA GCTGGGTGGG
CGGTACATTC CGGACATATT GTTGACTGCG CACGCGGAGG GGTTCGCCGA AACAACGGAT
TCTTTCCTCG GCGCCGGACA TGAAAAGCTC ACACCGCGCC AGCGCGAAGT TCTTCTGGAG
CTGGGCAAGG GCCGTTCCAA CCAGGAGATA GCGCATGTCC TGGGAATCTC GATCGCGACG
GTCAAACTGC ATGTGAATGC GATCCTTCAA ACGCTCGGCG TGCGCAACCG GACGGAAGCG
GCGATCATTG CGCTGCGCGC CGAGGCTTCA AGTGAGGAAT CGGCCTGA
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| Protein sequence | MRILVTGEQP IFCEGLSSIV NRLYAGATVR VVAGPRSLSG LDVGTAELVL LDIGAGQAPS
GADLLSDFVS RTEAKVVVFS DRSAPGYIRQ VMDLGVAGFV PKTIGVTLVE SALRLIELGG
RYIPDILLTA HAEGFAETTD SFLGAGHEKL TPRQREVLLE LGKGRSNQEI AHVLGISIAT
VKLHVNAILQ TLGVRNRTEA AIIALRAEAS SEESA
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