More than 300 homologs were found in PanDaTox collection
for query gene Plav_1690 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  100 
 
 		 215 aa  424  1e-118  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  36.28 
 
 		 224 aa  100  1e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  35.87 
 
 		 224 aa  99.4  3e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  34.47 
 
 		 222 aa  99  5e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  35.59 
 
 		 221 aa  96.3  3e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  28.84 
 
 		 239 aa  95.9  4e-19  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  32.71 
 
 		 218 aa  94  2e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  34.72 
 
 		 221 aa  92.8  3e-18  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  34.88 
 
 		 252 aa  92.4  4e-18  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  33.33 
 
 		 221 aa  90.1  2e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  32.84 
 
 		 209 aa  88.2  8e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  31.8 
 
 		 220 aa  87.4  1e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  32.2 
 
 		 210 aa  87.8  1e-16  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  31.36 
 
 		 227 aa  87.4  2e-16  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  36.94 
 
 		 216 aa  86.7  3e-16  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  32.41 
 
 		 227 aa  86.3  3e-16  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  31.71 
 
 		 210 aa  86.3  4e-16  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  45.08 
 
 		 231 aa  85.9  4e-16  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  32.39 
 
 		 224 aa  85.5  5e-16  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  40.94 
 
 		 223 aa  85.5  6e-16  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  30.62 
 
 		 219 aa  85.5  6e-16  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_009484  Acry_1738  response regulator receiver protein  35.4 
 
 		 267 aa  85.1  7e-16  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  25.24 
 
 		 213 aa  84.3  0.000000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  31.31 
 
 		 214 aa  84.3  0.000000000000001  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  31.31 
 
 		 214 aa  84.3  0.000000000000001  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  31.67 
 
 		 212 aa  83.6  0.000000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  45.16 
 
 		 225 aa  83.6  0.000000000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  34.6 
 
 		 224 aa  82.8  0.000000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  30.84 
 
 		 219 aa  82.8  0.000000000000004  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  26.32 
 
 		 227 aa  82.4  0.000000000000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  31.31 
 
 		 201 aa  82.4  0.000000000000004  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  36.8 
 
 		 224 aa  82.4  0.000000000000005  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  35.27 
 
 		 224 aa  82.4  0.000000000000005  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  31.07 
 
 		 210 aa  82  0.000000000000006  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  30.23 
 
 		 221 aa  82  0.000000000000006  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4795  two component transcriptional regulator, LuxR family  33.53 
 
 		 221 aa  81.3  0.00000000000001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.180506 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  31.06 
 
 		 248 aa  80.9  0.00000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  33.49 
 
 		 204 aa  81.3  0.00000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  31.58 
 
 		 214 aa  81.3  0.00000000000001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3718  two component transcriptional regulator, LuxR family  33.53 
 
 		 231 aa  81.3  0.00000000000001  Ralstonia pickettii 12D  Bacteria  normal  0.0262455  normal  0.571903 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  29.76 
 
 		 209 aa  80.1  0.00000000000002  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  31.4 
 
 		 251 aa  80.5  0.00000000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  32.02 
 
 		 209 aa  80.5  0.00000000000002  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  32.39 
 
 		 216 aa  80.1  0.00000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_003296  RSp0338  negative regulator of exopolysaccharide production transcription regulator protein  33.53 
 
 		 236 aa  79.7  0.00000000000003  Ralstonia solanacearum GMI1000  Bacteria  normal  0.104039  normal  1 
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  31.46 
 
 		 215 aa  79.7  0.00000000000003  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  33.49 
 
 		 209 aa  79.7  0.00000000000003  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3176  two component LuxR family transcriptional regulator  33.77 
 
 		 292 aa  79.7  0.00000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.0570221  normal  0.472976 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  31.31 
 
 		 215 aa  79.7  0.00000000000003  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  31.25 
 
 		 220 aa  79.7  0.00000000000003  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_010681  Bphyt_1379  two component transcriptional regulator, LuxR family  34.42 
 
 		 292 aa  79.7  0.00000000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0210202  hitchhiker  0.00446461 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  29.95 
 
 		 219 aa  79.3  0.00000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  29.44 
 
 		 218 aa  79  0.00000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  35.22 
 
 		 229 aa  79  0.00000000000006  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.190475 
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  37.78 
 
 		 219 aa  79  0.00000000000006  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  30.88 
 
 		 216 aa  79  0.00000000000006  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_002936  DET1561  LuxR family DNA-binding response regulator  30.48 
 
 		 226 aa  78.6  0.00000000000007  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.0012725  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  33.33 
 
 		 208 aa  78.2  0.00000000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  30.77 
 
 		 220 aa  78.2  0.00000000000008  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  29.95 
 
 		 220 aa  77.4  0.0000000000001  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  36.99 
 
 		 243 aa  77.4  0.0000000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  36.36 
 
 		 228 aa  77.8  0.0000000000001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  35.77 
 
 		 216 aa  77.8  0.0000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  31.25 
 
 		 220 aa  77.8  0.0000000000001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008686  Pden_2354  two component LuxR family transcriptional regulator  27.05 
 
 		 236 aa  77.4  0.0000000000001  Paracoccus denitrificans PD1222  Bacteria  normal  0.399998  normal  1 
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  30 
 
 		 211 aa  77.4  0.0000000000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  28.29 
 
 		 220 aa  77  0.0000000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  29.47 
 
 		 220 aa  77  0.0000000000002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_0807  two component transcriptional regulator, LuxR family  29.11 
 
 		 228 aa  77  0.0000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.218712 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  29.95 
 
 		 220 aa  77.4  0.0000000000002  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  29.44 
 
 		 218 aa  77  0.0000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  29.47 
 
 		 220 aa  77  0.0000000000002  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  31.4 
 
 		 209 aa  77.4  0.0000000000002  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  32.32 
 
 		 258 aa  76.6  0.0000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  31.02 
 
 		 211 aa  76.3  0.0000000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  31.43 
 
 		 209 aa  76.3  0.0000000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  37.27 
 
 		 230 aa  76.6  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  26.24 
 
 		 229 aa  76.3  0.0000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  27.57 
 
 		 223 aa  76.3  0.0000000000003  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  27.57 
 
 		 223 aa  76.3  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  30.43 
 
 		 251 aa  76.3  0.0000000000004  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_004578  PSPTO_0897  DNA-binding response regulator, LuxR family  32.85 
 
 		 207 aa  75.9  0.0000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009430  Rsph17025_4179  hypothetical protein  33.1 
 
 		 232 aa  75.9  0.0000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.365276 
 
 
-
 
NC_009439  Pmen_4040  two component LuxR family transcriptional regulator  34.65 
 
 		 216 aa  75.9  0.0000000000004  Pseudomonas mendocina ymp  Bacteria  normal  0.56786  normal  1 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  31.84 
 
 		 210 aa  75.9  0.0000000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  27.1 
 
 		 223 aa  75.9  0.0000000000004  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  29.82 
 
 		 221 aa  75.5  0.0000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  28.85 
 
 		 220 aa  75.5  0.0000000000005  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  29.82 
 
 		 221 aa  75.5  0.0000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.682063 
 
 
-
 
NC_009656  PSPA7_3950  LuxR family DNA-binding response regulator  33.81 
 
 		 210 aa  75.5  0.0000000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.331441  n/a   
 
 
-
 
NC_008254  Meso_2574  two component LuxR family transcriptional regulator  33.33 
 
 		 253 aa  75.9  0.0000000000005  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  30.33 
 
 		 238 aa  75.9  0.0000000000005  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  33.5 
 
 		 223 aa  75.5  0.0000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  31.79 
 
 		 219 aa  75.1  0.0000000000007  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  31.79 
 
 		 222 aa  75.1  0.0000000000007  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  30.05 
 
 		 218 aa  75.1  0.0000000000008  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007406  Nwi_0957  LuxR family transcriptional regulator  30.83 
 
 		 342 aa  75.1  0.0000000000008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.553991  normal  0.407109 
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  30.05 
 
 		 218 aa  75.1  0.0000000000008  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  37.59 
 
 		 204 aa  75.1  0.0000000000008  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_007964  Nham_2943  two component LuxR family transcriptional regulator  31.58 
 
 		 351 aa  74.3  0.000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  0.692808  n/a   
 
 
-
 
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