| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1379 |
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| Symbol | |
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| ID | 6282002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 1537360 |
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| End bp | 1538238 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642620939 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_001895018 |
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| Protein GI | 187923376 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0210202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00446461 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGATTCT CGATACTCAA CTCAGACGCC GAACGACGTG ACGGGCTCAA AGCACTGCTG
CGGCAAATCG ACCGCCTGGC GCGTTTCAAC GAGGCACAAG ACTGGCGTCA GGTCGAACGC
ACGCTCAAAC GTCAGCGGCC CGATCTGCTG CTGGTCGATT GGGAGGACTG GATGTCGATC
GCGGACGTTC GCCATCTGCT CAGCCATTAC CCTGATCTGC GCGTTGCCGT GCTCTCAGAT
CAGATCTCGC CGGCCGCGGT GCGAGATCTC ATGGACGAGG GCGTGCTCGG CGTCGTGCCG
CGCGACACCG ATCCTTGCCT GATCGTGCGC GCGTTCGAAA TGGTGCTGCT GGGCGGGCAC
TACGTACCGC CTGGCGCGCT GGCGCTGGAT CCTCCGCTGC CACCGGACAT CACTATCCGG
CCGTTCGACG AAAAGAGCCC GCCACCGCGC CGCGCCAGAC TGGCCAACGT ACTGTCGCCC
CGTCAGCAGC AGATCATGCG CTGCGTCCAT ATGGGGAGCA CCAACAAGAT GATCGCGCGC
ACGCTCGGCA TTAGCGAGGG CACCGTCAAG ATCCATTTGA CCAGCATATT CCAACAGCTC
GGCGCGCCGA ACCGCGCGGC CGCGGTCGCG CTCTATAACG GCTGGCTGTC GAACCATTTG
CAAGTGCTGC GCAATGGCGG CGACGGCCCG GTGCGCCCCA TCATGGGCCA GCCCGGCGTA
GTGCCGTTAC GGCGTCGCGC GCGGCGGCGC TTTCAGTATC CGTTGCCGGC TAACGACACC
GCGGCATTGT TGCCCATGGC GGCAGAACCA GGTGCACCGT ATGGCGATGC ACCGTCCACC
GGGCCCGCAT CGGACCCGCT CGCACAAGGT CCTGCATGA
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| Protein sequence | MRFSILNSDA ERRDGLKALL RQIDRLARFN EAQDWRQVER TLKRQRPDLL LVDWEDWMSI
ADVRHLLSHY PDLRVAVLSD QISPAAVRDL MDEGVLGVVP RDTDPCLIVR AFEMVLLGGH
YVPPGALALD PPLPPDITIR PFDEKSPPPR RARLANVLSP RQQQIMRCVH MGSTNKMIAR
TLGISEGTVK IHLTSIFQQL GAPNRAAAVA LYNGWLSNHL QVLRNGGDGP VRPIMGQPGV
VPLRRRARRR FQYPLPANDT AALLPMAAEP GAPYGDAPST GPASDPLAQG PA
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