More than 300 homologs were found in PanDaTox collection
for query gene Rru_A2232 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  100 
 
 		 212 aa  426  1e-118  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  40.99 
 
 		 224 aa  158  7e-38  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  38.89 
 
 		 221 aa  129  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  37.38 
 
 		 209 aa  127  1.0000000000000001e-28  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  35.29 
 
 		 219 aa  122  4e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  38.21 
 
 		 207 aa  121  9e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  34.72 
 
 		 220 aa  119  3e-26  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  35.94 
 
 		 224 aa  119  3e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  35.58 
 
 		 221 aa  117  9e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  31.86 
 
 		 227 aa  117  9.999999999999999e-26  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  35.58 
 
 		 221 aa  116  3e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  35 
 
 		 209 aa  115  3.9999999999999997e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  36.27 
 
 		 221 aa  115  5e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  32.13 
 
 		 227 aa  114  7.999999999999999e-25  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  36.53 
 
 		 219 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  38.71 
 
 		 220 aa  113  2.0000000000000002e-24  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  36.28 
 
 		 215 aa  112  3e-24  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  35.92 
 
 		 213 aa  111  9e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_007974  Rmet_4854  putative two component LuxR family transcriptional regulator  32.73 
 
 		 211 aa  110  1.0000000000000001e-23  Cupriavidus metallidurans CH34  Bacteria  normal  0.133138  normal  0.31096 
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  34.13 
 
 		 210 aa  109  2.0000000000000002e-23  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  35.68 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  34.13 
 
 		 252 aa  109  3e-23  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  36.16 
 
 		 230 aa  108  7.000000000000001e-23  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  35.4 
 
 		 226 aa  108  7.000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  36.27 
 
 		 222 aa  108  7.000000000000001e-23  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.24 
 
 		 213 aa  107  1e-22  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  35.81 
 
 		 238 aa  107  1e-22  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  35.98 
 
 		 209 aa  106  2e-22  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  33.98 
 
 		 224 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  35.05 
 
 		 219 aa  106  2e-22  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  34.11 
 
 		 222 aa  107  2e-22  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  36.71 
 
 		 220 aa  106  3e-22  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  37.38 
 
 		 220 aa  106  3e-22  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  37.56 
 
 		 220 aa  106  3e-22  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  37.38 
 
 		 220 aa  106  3e-22  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  36.59 
 
 		 220 aa  106  3e-22  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  35.21 
 
 		 213 aa  105  4e-22  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  36.07 
 
 		 221 aa  105  4e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  34.45 
 
 		 228 aa  105  4e-22  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  34.58 
 
 		 230 aa  105  5e-22  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  36.41 
 
 		 220 aa  105  5e-22  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  33.18 
 
 		 214 aa  105  5e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  32.71 
 
 		 232 aa  105  5e-22  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_007777  Francci3_3253  two component LuxR family transcriptional regulator  38.6 
 
 		 213 aa  105  6e-22  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  29.72 
 
 		 212 aa  105  6e-22  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  35.92 
 
 		 220 aa  105  6e-22  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  33.02 
 
 		 209 aa  105  7e-22  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  35.92 
 
 		 220 aa  105  7e-22  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  36.1 
 
 		 219 aa  104  8e-22  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  36.76 
 
 		 209 aa  104  9e-22  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  36.59 
 
 		 219 aa  103  1e-21  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  33.18 
 
 		 224 aa  104  1e-21  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  34.91 
 
 		 223 aa  103  1e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  35.62 
 
 		 215 aa  103  1e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  34.27 
 
 		 212 aa  103  2e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  34.95 
 
 		 215 aa  103  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  37.38 
 
 		 212 aa  103  2e-21  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  35.41 
 
 		 218 aa  103  2e-21  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  32.84 
 
 		 227 aa  103  2e-21  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  35.44 
 
 		 220 aa  103  2e-21  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  34.58 
 
 		 219 aa  102  3e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  34.16 
 
 		 215 aa  102  4e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  36.32 
 
 		 224 aa  102  5e-21  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  36.02 
 
 		 225 aa  102  5e-21  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  34.98 
 
 		 215 aa  102  5e-21  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  38.16 
 
 		 231 aa  102  6e-21  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  34.86 
 
 		 210 aa  102  6e-21  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  35.85 
 
 		 225 aa  101  7e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_008781  Pnap_2689  two component LuxR family transcriptional regulator  32.55 
 
 		 224 aa  101  7e-21  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.270095  normal  0.632538 
 
 
-
 
NC_009972  Haur_1563  two component LuxR family transcriptional regulator  32.16 
 
 		 257 aa  101  8e-21  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.781509  n/a   
 
 
-
 
NC_013441  Gbro_2730  response regulator receiver  36.63 
 
 		 216 aa  101  8e-21  Gordonia bronchialis DSM 43247  Bacteria  normal  0.776601  n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  36.49 
 
 		 213 aa  101  9e-21  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  33.17 
 
 		 215 aa  100  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.99 
 
 		 208 aa  101  1e-20  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  32.71 
 
 		 213 aa  101  1e-20  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  32.88 
 
 		 230 aa  100  1e-20  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  35.85 
 
 		 224 aa  101  1e-20  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  35.43 
 
 		 205 aa  100  1e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  32.73 
 
 		 225 aa  101  1e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  33.66 
 
 		 215 aa  99.8  2e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  33.64 
 
 		 224 aa  100  2e-20  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  33.5 
 
 		 223 aa  100  2e-20  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  33.82 
 
 		 245 aa  100  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  33.18 
 
 		 204 aa  100  2e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  31.03 
 
 		 211 aa  100  2e-20  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  32.51 
 
 		 216 aa  99.4  3e-20  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  32.51 
 
 		 216 aa  99.4  3e-20  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  33 
 
 		 223 aa  99.8  3e-20  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  34.78 
 
 		 221 aa  99.8  3e-20  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  33.49 
 
 		 239 aa  99.4  4e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0105  two component LuxR family transcriptional regulator  33.18 
 
 		 219 aa  99  4e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  1  normal  0.0920509 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  34.42 
 
 		 217 aa  99.4  4e-20  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  34.1 
 
 		 235 aa  99.4  4e-20  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal  1 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  34.29 
 
 		 213 aa  99  5e-20  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  33 
 
 		 223 aa  99  5e-20  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  32.32 
 
 		 207 aa  98.6  6e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  31.84 
 
 		 225 aa  98.6  6e-20  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  35.81 
 
 		 218 aa  98.6  7e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  30.99 
 
 		 216 aa  98.2  7e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  33 
 
 		 216 aa  98.2  8e-20  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
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