More than 300 homologs were found in PanDaTox collection
for query gene Rru_A2603 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  100 
 
 		 226 aa  453  1e-127  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  36.73 
 
 		 224 aa  126  2.0000000000000002e-28  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  37.28 
 
 		 227 aa  121  9.999999999999999e-27  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  35.78 
 
 		 222 aa  111  7.000000000000001e-24  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  37.83 
 
 		 224 aa  110  1.0000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  29.65 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  30.22 
 
 		 212 aa  109  4.0000000000000004e-23  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  35.4 
 
 		 212 aa  108  8.000000000000001e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  39.39 
 
 		 216 aa  107  1e-22  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  106  2e-22  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  34.86 
 
 		 221 aa  106  3e-22  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  106  3e-22  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  33.48 
 
 		 210 aa  105  5e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  35.47 
 
 		 221 aa  105  6e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  104  1e-21  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.27 
 
 		 216 aa  104  1e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  29.65 
 
 		 219 aa  104  1e-21  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  104  1e-21  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_010623  Bphy_5117  two component LuxR family transcriptional regulator  27.95 
 
 		 253 aa  103  2e-21  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.180541 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  31.7 
 
 		 218 aa  103  2e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  30 
 
 		 220 aa  103  2e-21  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  30.09 
 
 		 219 aa  103  2e-21  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  103  2e-21  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  30.45 
 
 		 220 aa  103  2e-21  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  30.45 
 
 		 220 aa  103  3e-21  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  29.22 
 
 		 249 aa  103  3e-21  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  29.82 
 
 		 220 aa  101  9e-21  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  32.59 
 
 		 219 aa  101  1e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  29.65 
 
 		 238 aa  101  1e-20  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  29.96 
 
 		 219 aa  99.4  4e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  32.44 
 
 		 209 aa  99.4  4e-20  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  30.09 
 
 		 219 aa  99  5e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  32.2 
 
 		 227 aa  99  5e-20  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  99  5e-20  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  31.25 
 
 		 216 aa  99  6e-20  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
NC_010676  Bphyt_4850  two component transcriptional regulator, LuxR family  28.29 
 
 		 257 aa  98.2  8e-20  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0778424  normal  0.0399542 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  32.43 
 
 		 227 aa  97.8  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  33.19 
 
 		 248 aa  98.2  1e-19  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0102  two component transcriptional regulator, LuxR family  34.98 
 
 		 221 aa  97.4  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0637251  normal  1 
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  35.4 
 
 		 220 aa  96.7  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  29.09 
 
 		 201 aa  97.1  2e-19  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2037  two component transcriptional regulator, LuxR family  34.98 
 
 		 225 aa  97.4  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.137578 
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  33.78 
 
 		 214 aa  96.7  3e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  31.25 
 
 		 210 aa  95.9  4e-19  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  33.48 
 
 		 220 aa  96.3  4e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  33.63 
 
 		 216 aa  95.9  4e-19  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  35 
 
 		 217 aa  95.5  5e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_3768  two component transcriptional regulator, LuxR family  33.64 
 
 		 223 aa  95.5  5e-19  Conexibacter woesei DSM 14684  Bacteria  normal  0.28303  normal  0.763501 
 
 
-
 
NC_008463  PA14_46360  putative two-component response regulator  34.22 
 
 		 210 aa  95.5  5e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.016821 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  30.4 
 
 		 213 aa  95.1  7e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  28.18 
 
 		 228 aa  94.7  9e-19  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.23 
 
 		 226 aa  95.1  9e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_3507  two component transcriptional regulator, LuxR family  33.03 
 
 		 213 aa  94.7  1e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.892641  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  30.49 
 
 		 209 aa  94.7  1e-18  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  30.91 
 
 		 203 aa  94.7  1e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  30.41 
 
 		 232 aa  94.7  1e-18  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  30.14 
 
 		 239 aa  94.7  1e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  33.03 
 
 		 213 aa  93.6  2e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  33.93 
 
 		 220 aa  94  2e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  34.23 
 
 		 230 aa  93.6  2e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_0366  two component transcriptional regulator, LuxR family  32.61 
 
 		 220 aa  94  2e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.0587069  normal  0.203995 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  34.05 
 
 		 230 aa  93.6  2e-18  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  30.8 
 
 		 210 aa  94  2e-18  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  28.57 
 
 		 219 aa  93.2  3e-18  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  30.36 
 
 		 215 aa  93.2  3e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  27.75 
 
 		 220 aa  92.8  3e-18  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  30.77 
 
 		 209 aa  93.2  3e-18  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  32.73 
 
 		 229 aa  93.2  3e-18  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  30.74 
 
 		 221 aa  92.4  5e-18  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  31.58 
 
 		 217 aa  92.4  6e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  33.33 
 
 		 220 aa  92  7e-18  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  31.94 
 
 		 221 aa  92  7e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  26.84 
 
 		 218 aa  92  7e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  29.13 
 
 		 219 aa  91.7  8e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  33.18 
 
 		 221 aa  91.7  9e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  28.64 
 
 		 216 aa  91.7  9e-18  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  30.22 
 
 		 219 aa  91.7  9e-18  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  29.41 
 
 		 208 aa  91.3  1e-17  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  32.43 
 
 		 215 aa  91.3  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  34.36 
 
 		 218 aa  91.7  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  31.16 
 
 		 224 aa  91.3  1e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_012669  Bcav_1731  two component transcriptional regulator, LuxR family  31.67 
 
 		 224 aa  91.3  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.550315  normal  1 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  33.04 
 
 		 222 aa  91.3  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013159  Svir_38420  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.46 
 
 		 226 aa  91.7  1e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  31.48 
 
 		 221 aa  90.9  1e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_012669  Bcav_2449  two component transcriptional regulator, LuxR family  34.67 
 
 		 220 aa  90.9  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.729355  normal  1 
 
 
-
 
NC_013131  Caci_5202  two component transcriptional regulator, LuxR family  32.02 
 
 		 225 aa  91.3  1e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.677169  normal  0.920773 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  33.33 
 
 		 209 aa  90.9  2e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  31.25 
 
 		 211 aa  90.1  2e-17  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  31.19 
 
 		 221 aa  90.5  2e-17  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_2225  two component transcriptional regulator, LuxR family  32.89 
 
 		 209 aa  90.5  2e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  33.8 
 
 		 223 aa  90.5  2e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  33.33 
 
 		 218 aa  89.7  3e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  30.13 
 
 		 216 aa  89.7  3e-17  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  30.04 
 
 		 216 aa  89.7  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_009921  Franean1_1435  two component LuxR family transcriptional regulator  31.22 
 
 		 218 aa  89.7  3e-17  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  28.96 
 
 		 214 aa  89.7  3e-17  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  34.23 
 
 		 226 aa  89.7  3e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.14 
 
 		 239 aa  90.1  3e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  30.7 
 
 		 230 aa  89.7  3e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
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