| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1571 |
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| Symbol | |
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| ID | 3965099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2018239 |
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| End bp | 2018922 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920649 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_527045 |
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| Protein GI | 90021218 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAT TGTTGGTAGA AGATCATTTG TTGTTCAGGG ATGGTGTTAG CCTTATTTTA
GAAAGGCTCG ATCCAAATAC AGAAATAACG CCCTGCGGCA CAGGAGCCGA TGCCTTTGCT
CTAGCTCAAC AACACGCGGA CTTCTCGCTG GTATTGCTAG ATTACAATTT ACCCGATACC
ACAGGGCTTA ATTGCCTAGC TCAAATTCAA GCTCATCTCC CCACTACCCC TATTGTTATG
CTATCGGCAG AAAACAAAGC CGAGCTTATT CAACAAGTAC TGGCTGCGGG CGCCCGCGGG
TTTATTACCA AAACCTCGCC TTCTGATGTA ATGATAAGTG CAATTAAGCT TGTACTTTCT
GGTGGAGTTT ACATTCCGCA AGAAATGATA AGCGCACTAA ATATGCCTTT TACGGCGCAC
AGCAGCGACG GTATCACTCA CGCAGCGTCA CCCGCACCTC AAACCGCACC CCCTGCAACT
GGTGATCATC AATTAACCGA AAGGCAATTG CATGTGCTAC ACGAAATGCT TAAGGGTTTG
TCTAATAAAG AAATTGCGCG CGAGCTAAAC ATGTCACCCA GCACAGTAAA AGTGCACGTA
GCGGCAATAT TGCGCGAATT TAATGTTAAA AATCGCACTC AGGCTGTTGC ACATGCACGC
CAAAAAAATA TTATTACGCA ATAA
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| Protein sequence | MKVLLVEDHL LFRDGVSLIL ERLDPNTEIT PCGTGADAFA LAQQHADFSL VLLDYNLPDT
TGLNCLAQIQ AHLPTTPIVM LSAENKAELI QQVLAAGARG FITKTSPSDV MISAIKLVLS
GGVYIPQEMI SALNMPFTAH SSDGITHAAS PAPQTAPPAT GDHQLTERQL HVLHEMLKGL
SNKEIARELN MSPSTVKVHV AAILREFNVK NRTQAVAHAR QKNIITQ
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