More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_4850 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010676  Bphyt_4850  two component transcriptional regulator, LuxR family  100 
 
 		 257 aa  510  1e-143  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0778424  normal  0.0399542 
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  88.33 
 
 		 249 aa  432  1e-120  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_010623  Bphy_5117  two component LuxR family transcriptional regulator  82.49 
 
 		 253 aa  396  1e-109  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.180541 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  37.89 
 
 		 227 aa  152  4e-36  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_010622  Bphy_1975  two component LuxR family transcriptional regulator  37.94 
 
 		 293 aa  145  5e-34  Burkholderia phymatum STM815  Bacteria  normal  0.0150451  normal  1 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  36.69 
 
 		 224 aa  141  9.999999999999999e-33  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  35.51 
 
 		 227 aa  136  4e-31  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A3176  two component LuxR family transcriptional regulator  36.36 
 
 		 292 aa  135  5e-31  Burkholderia xenovorans LB400  Bacteria  normal  0.0570221  normal  0.472976 
 
 
-
 
NC_007651  BTH_I1094  DNA-binding response regulator  34.66 
 
 		 279 aa  135  6.0000000000000005e-31  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000582737  n/a   
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  37.1 
 
 		 224 aa  134  9.999999999999999e-31  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010681  Bphyt_1379  two component transcriptional regulator, LuxR family  36.08 
 
 		 292 aa  134  1.9999999999999998e-30  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0210202  hitchhiker  0.00446461 
 
 
-
 
NC_007434  BURPS1710b_1471  DNA-binding response regulator  34.66 
 
 		 363 aa  133  3e-30  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.0000000100474  n/a   
 
 
-
 
NC_009076  BURPS1106A_1334  putative DNA-binding response regulator  34.66 
 
 		 279 aa  133  3e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.07086  n/a   
 
 
-
 
NC_009074  BURPS668_1325  putative DNA-binding response regulator  34.66 
 
 		 279 aa  133  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.0852238  n/a   
 
 
-
 
NC_006348  BMA1795  DNA-binding response regulator  34.26 
 
 		 279 aa  132  6.999999999999999e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0488628  n/a   
 
 
-
 
NC_009080  BMA10247_0448  DNA-binding response regulator  34.26 
 
 		 279 aa  132  6.999999999999999e-30  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.00573595  n/a   
 
 
-
 
NC_008836  BMA10229_A0704  DNA-binding response regulator  34.26 
 
 		 279 aa  132  6.999999999999999e-30  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.000213253  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1165  DNA-binding response regulator  34.26 
 
 		 279 aa  132  6.999999999999999e-30  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.0000000742681  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  34.69 
 
 		 220 aa  129  4.0000000000000003e-29  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  33.47 
 
 		 222 aa  127  2.0000000000000002e-28  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A1151  two-component response regulator  34.8 
 
 		 248 aa  126  3e-28  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  34.69 
 
 		 210 aa  124  1e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  34.29 
 
 		 209 aa  124  2e-27  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008390  Bamb_2257  two component LuxR family transcriptional regulator  35.32 
 
 		 276 aa  120  1.9999999999999998e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.0303794  n/a   
 
 
-
 
NC_010551  BamMC406_2136  two component LuxR family transcriptional regulator  35.32 
 
 		 276 aa  120  3e-26  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00080353  normal  0.948234 
 
 
-
 
NC_010084  Bmul_1058  two component LuxR family transcriptional regulator  35.18 
 
 		 278 aa  119  4.9999999999999996e-26  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.0000154316  normal  1 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  32.23 
 
 		 221 aa  118  9.999999999999999e-26  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_007510  Bcep18194_A5547  two component LuxR family transcriptional regulator  35.18 
 
 		 278 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000595114  normal  0.307303 
 
 
-
 
NC_010508  Bcenmc03_2243  two component LuxR family transcriptional regulator  35.57 
 
 		 278 aa  116  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.0000421268  normal  1 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  31.02 
 
 		 219 aa  115  5e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.001499 
 
 
-
 
NC_011662  Tmz1t_3355  two component transcriptional regulator, LuxR family  35.48 
 
 		 208 aa  115  6.9999999999999995e-25  Thauera sp. MZ1T  Bacteria  normal  0.687232  n/a   
 
 
-
 
NC_008060  Bcen_1607  two component LuxR family transcriptional regulator  35.57 
 
 		 278 aa  115  8.999999999999998e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0202468  n/a   
 
 
-
 
NC_008542  Bcen2424_2219  two component LuxR family transcriptional regulator  35.57 
 
 		 278 aa  115  8.999999999999998e-25  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.00895129  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  28.34 
 
 		 212 aa  114  1.0000000000000001e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  29.2 
 
 		 221 aa  113  2.0000000000000002e-24  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  31.4 
 
 		 221 aa  113  3e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  30.89 
 
 		 221 aa  113  3e-24  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  29.39 
 
 		 238 aa  112  5e-24  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  31.02 
 
 		 224 aa  112  6e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  29.3 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  31.02 
 
 		 219 aa  110  2.0000000000000002e-23  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal  1 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  30.74 
 
 		 220 aa  110  2.0000000000000002e-23  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  34.16 
 
 		 228 aa  109  4.0000000000000004e-23  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  31.69 
 
 		 215 aa  109  4.0000000000000004e-23  Azotobacter vinelandii DJ  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  35.92 
 
 		 209 aa  109  5e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  32.51 
 
 		 221 aa  109  5e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  30.35 
 
 		 220 aa  109  6e-23  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  0.0000152825 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  30.77 
 
 		 220 aa  108  7.000000000000001e-23  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  30.86 
 
 		 215 aa  108  7.000000000000001e-23  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  30.77 
 
 		 220 aa  108  7.000000000000001e-23  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  30.77 
 
 		 220 aa  108  7.000000000000001e-23  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  30.36 
 
 		 220 aa  108  1e-22  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  0.00000000166193 
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  31.15 
 
 		 219 aa  107  2e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  30.31 
 
 		 224 aa  107  2e-22  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  29.8 
 
 		 220 aa  106  3e-22  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  30.08 
 
 		 220 aa  106  3e-22  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  29.39 
 
 		 220 aa  105  5e-22  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  31.82 
 
 		 215 aa  105  6e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  31.73 
 
 		 232 aa  105  6e-22  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  29.8 
 
 		 219 aa  105  8e-22  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  31.4 
 
 		 215 aa  104  1e-21  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  30.61 
 
 		 219 aa  104  1e-21  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  31.12 
 
 		 216 aa  104  2e-21  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  31.28 
 
 		 216 aa  103  2e-21  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  29.39 
 
 		 209 aa  103  3e-21  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  31.4 
 
 		 223 aa  103  4e-21  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  29.84 
 
 		 221 aa  102  7e-21  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  31.4 
 
 		 224 aa  102  9e-21  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  31.69 
 
 		 221 aa  101  1e-20  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal  1 
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  31.98 
 
 		 230 aa  101  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  29.84 
 
 		 221 aa  101  1e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  31.4 
 
 		 224 aa  101  1e-20  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  29.53 
 
 		 221 aa  101  1e-20  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  31.76 
 
 		 243 aa  101  1e-20  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_2173  two component LuxR family transcriptional regulator  31.69 
 
 		 221 aa  100  2e-20  Pseudomonas putida F1  Bacteria  normal  0.548338  normal  1 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  30.4 
 
 		 218 aa  101  2e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  29.08 
 
 		 226 aa  100  2e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_009719  Plav_2326  two component LuxR family transcriptional regulator  30.2 
 
 		 210 aa  100  2e-20  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  hitchhiker  0.000518478 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  30.86 
 
 		 217 aa  100  2e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  30.74 
 
 		 219 aa  100  2e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  27.98 
 
 		 227 aa  100  2e-20  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  27.27 
 
 		 201 aa  100  2e-20  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  30.86 
 
 		 217 aa  100  2e-20  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  27.2 
 
 		 218 aa  100  3e-20  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  29.67 
 
 		 204 aa  99.4  5e-20  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  30.58 
 
 		 225 aa  98.6  8e-20  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  30.61 
 
 		 251 aa  98.6  8e-20  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_007908  Rfer_2039  two component LuxR family transcriptional regulator  30.33 
 
 		 212 aa  98.6  8e-20  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  30.86 
 
 		 216 aa  98.6  8e-20  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  30.45 
 
 		 216 aa  97.8  1e-19  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  30.61 
 
 		 251 aa  97.8  1e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  26.98 
 
 		 213 aa  98.2  1e-19  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  29.22 
 
 		 218 aa  98.2  1e-19  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  30.45 
 
 		 216 aa  97.8  1e-19  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1299  two component LuxR family transcriptional regulator  32.1 
 
 		 273 aa  97.4  2e-19  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0170327 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  29.22 
 
 		 214 aa  97.8  2e-19  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_1159  two component LuxR family transcriptional regulator  32.16 
 
 		 209 aa  97.4  2e-19  Sphingomonas wittichii RW1  Bacteria  normal  0.942847  normal  0.660482 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  28.87 
 
 		 219 aa  97.1  3e-19  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  27.24 
 
 		 212 aa  97.1  3e-19  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  30.68 
 
 		 210 aa  96.7  3e-19  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
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