| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_1299 |
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| Symbol | |
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| ID | 6163951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 1385335 |
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| End bp | 1386156 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641664053 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001790333 |
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| Protein GI | 171057984 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0170327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTCT TGATGATCGA CGACCATCCG TTGATCCTGG CGGCGATGCA GAACGTCGTG
CGCGGCCTCG GCGTTCACGT GCGCGTGACG GGTGTCGAGA CCCCCGACGA GGCGCGCCAG
AGGCTGGTGC CGCCGCACGA TTTCGACCTG ATCCTGCTCG ACCTCCTGCT GGGCAGCGGC
GACGACGGCT ACGACTTCCT GATCGAGCTG CGCGCCAGCC ATCCGGCGCT GCCGGTGGTG
GTGATCTCGG CGTCGGAGCG CGCCGCCGAC GTGATCCGCT GCATCGACGG CGGCGCGATG
GGTTTCGTGC CCAAGCGCGC CAGCAACGAG ATGCTGTTCG AGGCCCTGCA CCTGGTCATG
TCGGGCGGCA TCTACGTGCC GCCGATGGCC CGTGGCCTGG GCGGGCCGAA CCTGCCGTCG
GTGCCCGACG CGCAGGTGTT TCCGGGCCTG CCGGCGCAGG GGCCGCTGTC GATCGCCGCC
GCCGGGCCGC GCGACCGCCC GGACGGCGTC CACGCCGGCA TGTCGATCGG GCCGTGGTCG
TCGCGCGGCA TGGCGCTGCC GCGGCCCGCC TCGCTCGATG CGCTCGGCCT GACGCCGCGC
CAGGCGAAGG TGCTGATGCT GTTGATGGAA GGCAAGGCCA ACAAGGTGAT CGCCAAGGAA
CTGGGCCTGT CGGTCGAGAC CGTCAAGGAT CACGTCGCCG CCGTGCTGCG GTGCCTGGGC
GTGCGTTCGC GCATGCAGGC GGTGATCGCG GTGCGCCACC TGCCGCAGCC GGGGCCGTCG
GCGCATCAGC CGCAGCCGGG GCCGGCCGGG CCGCCTTCGT GA
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| Protein sequence | MKVLMIDDHP LILAAMQNVV RGLGVHVRVT GVETPDEARQ RLVPPHDFDL ILLDLLLGSG
DDGYDFLIEL RASHPALPVV VISASERAAD VIRCIDGGAM GFVPKRASNE MLFEALHLVM
SGGIYVPPMA RGLGGPNLPS VPDAQVFPGL PAQGPLSIAA AGPRDRPDGV HAGMSIGPWS
SRGMALPRPA SLDALGLTPR QAKVLMLLME GKANKVIAKE LGLSVETVKD HVAAVLRCLG
VRSRMQAVIA VRHLPQPGPS AHQPQPGPAG PPS
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