| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4854 |
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| Symbol | |
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| ID | 4041716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 1512366 |
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| End bp | 1513001 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637980275 |
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| Product | putative two component LuxR family transcriptional regulator |
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| Protein accession | YP_586985 |
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| Protein GI | 94313776 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.133138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.31096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAG CCCGGCTTCT GTTGATCGAT GACCACACGC TGTTCCGCAC CGGACTGAAG
CTATTGCTGG CCGCCAGCCC GAACGTCGCG TCGATCATGG AGGCGGGATC GGTCATGGAG
GCCACCGAGG CGCATGGCGA CAAGCCGGTC GATATCCTGT TGCTGGATAT CCAGATGCCT
GGGCTGAATG GCATCGAGGG CATCAAGGTG CTCCGTCGGC ATTTCTCCCG CGCCCCGATC
GTGATCGTCT CCGGCACGTC GGGCATCGAC GCGATTCCCG ACGAGGCACG CAAGGAAGTC
GCTGGTTTCT TGCCGAAATC CGCCGACCCG CGCGAGATCG AGGAAGCGAT TGCCTGCTGC
CTGGCGGGCG GCACGTACTT CCAGACCGAA CAGCCCGGCG ACCGCCTCCC CCACACCCGG
GCCTACAAGC CCAGCCAGCT CACGCCGCGC CAGCTCGAGG TCCTGAACCA GCTCAATCTG
GGGCGTTCGA ACAAGGTCAT CGCCTATCAC CTCGGCCTGT CGGAAAACAC CGTACGCGTG
CACGTGGCGG CGATTCTCGA CCACCTCGGC GTGGTCAGCC GCGTGGAAGC CATTCTCGAA
GCCCAGCGCC GCGGTCTGGT GCAGGCACAA CGCTGA
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| Protein sequence | MSQARLLLID DHTLFRTGLK LLLAASPNVA SIMEAGSVME ATEAHGDKPV DILLLDIQMP
GLNGIEGIKV LRRHFSRAPI VIVSGTSGID AIPDEARKEV AGFLPKSADP REIEEAIACC
LAGGTYFQTE QPGDRLPHTR AYKPSQLTPR QLEVLNQLNL GRSNKVIAYH LGLSENTVRV
HVAAILDHLG VVSRVEAILE AQRRGLVQAQ R
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