| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0957 |
|---|
| Symbol | |
|---|
| ID | 3674974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 1050572 |
|---|
| End bp | 1051600 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637712506 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_317571 |
|---|
| Protein GI | 75675150 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.553991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.407109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA ATGAATATCG TTGTTCTGAC GGAAGCCATT TTTCTCATCA TTTCACACCG
ACTGACCAGA GAGTCCGCAA GACATCCGCC CCGGTCCGAG TAGCTTATCC ACGTCCTCCT
CTCGACCCTC GGCCACAACT GAATGTCGGA AGCGCCTCAT GCGGTGCATC GCCTCCGACG
CGCCGACACC GACAAGCGCG ATTGCAGAAC GCTGCTATTG TTAATGTAGA CTCGCCCTGG
CAGGCGCGTC CAAAGAACCC CGCAGCCAGG CCCTCCTCAC CACCACCATC AACACAAGCT
GCAGACCTCG ATCACAACAG CCGGACCGCG CAATGCGTCA GCGGAACGAA AGATTCGTTC
GACGCCGGGC CAAAGCCCGC GCAGAACTCG ATTATCATTA TCGATGAAAG AGCCCTTGTC
CGCGATTGCC TGGTGTATTG TTTGCAAGCC AGGTATGTCA GTCATGCGGT CTTTTCGTTC
GCGACTTTGT CAGACTGGAT GAAGGTAGCG GGCGATTTTC CTGCTCCCTC GGTTATCCTT
CTCTACGCTC GGACTCCCCA AAAGAAGACG CTGAATGATA TCGATGACAT CGAGAGCCTC
GCTCGCGTCG CCGTGAGCGC GCCCTTGATC ATCGTATCGG ATGTCGAGGA CGGATCACGG
GTCATGCGCG CGATCGAGAG CGGCGCGCGG GGTTATATTC CAACAAGCAT GACCCTCGGC
ATCGCCCTGG AAGCGGTGCG ATTGGTAGAA GCCGGCGGCA CGTTTGTCCC CATCAGCGTG
ATGTCGTCTT TCCAGAACGC CGGTCATGAT GAAAGCCAGC TATTCACCTC GCGTCAGATC
ATGGTCATCG AGGCGTTGCG CCGCGGCAAG GCGAACAAGC AGATCGCCTA CGAACTCGGC
ATGTGTGAAA GCACCGTGAA AGCCCACATC CGTCACATCA TGCGCAAGCT CAAGGCCCGG
AACCGTACGG AGGTCGCGAT GATGGTGAGC AGCTTGTTTG AAAGGCTGGA ACACGACCGG
GCTGATTAA
|
|---|
| Protein sequence | MSANEYRCSD GSHFSHHFTP TDQRVRKTSA PVRVAYPRPP LDPRPQLNVG SASCGASPPT
RRHRQARLQN AAIVNVDSPW QARPKNPAAR PSSPPPSTQA ADLDHNSRTA QCVSGTKDSF
DAGPKPAQNS IIIIDERALV RDCLVYCLQA RYVSHAVFSF ATLSDWMKVA GDFPAPSVIL
LYARTPQKKT LNDIDDIESL ARVAVSAPLI IVSDVEDGSR VMRAIESGAR GYIPTSMTLG
IALEAVRLVE AGGTFVPISV MSSFQNAGHD ESQLFTSRQI MVIEALRRGK ANKQIAYELG
MCESTVKAHI RHIMRKLKAR NRTEVAMMVS SLFERLEHDR AD
|
|---|
| |