Gene Rsph17025_4078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4078 
Symbol 
ID5086251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp130883 
End bp131614 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID640485641 
Producthypothetical protein 
Protein accessionYP_001170235 
Protein GI146280078 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0439982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0668702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCACCA AGGCCATGGA AAGAGTTGAG AGTCGCAAGT TGTTCTGGCT CGTGGACGGG 
CATGCGCTGC GCAGGGCGAG CCTTTGTGTC TTCCTGATGC CCTGGGCGCA CAAGCGGCGG
CTGGACCTGC GCCAGTTCGC GGACCCGGCC GAGGCGGAGG GCGGGGAGGT GCCCGAGATC
TGCCTGCTGA GCACCGGCTC GCGGTCGCTG CGGGACGAGG GGGTGCGGCG CAGCCTGGAC
GGGATCGCCT CCGCCGCGGG CGATGTGCCG GTCATCCTGA TGCCCGAGCG CATGGACGAG
GAGGATGTCC GCGACGCGCT GCACCTGGGG GTGCGTGGCC TGCTGCCCAC CAGCATCGAG
CCCCGGGTCG CCATCGCGGC GCTGGATCTG GTGCTGGCGG GGGGCTGCTA CTTTCCCGTC
GAGGTGCCGG CGGGACAGCC GTTCCCGCTT CCCTCCCCCG GGCCGGCGAC CGGCTTGCGC
GAGGCGCCCC TGGCCGCCGA GGGCCTCGAC ATGCCGCTGA CCGACCGGCA GAACGAGGTC
CTGCGCTCGC TCGGGGCGGG GGCCTCGAAC AAGGAGATCG CCCGCCAGCT CTCGATCTCT
GAGGCGACGG TCAAGATCCA TGTGCGGCAC CTGATGCGGA AATACGGCGT CAGCAACCGG
ACGCAGGTGG CCATCCTCGC GATGCGGAAG ACCGCGGAGG TGGCTGACCT GCGCAGCCCG
CGGCGGGCCT GA
 
Protein sequence
MLTKAMERVE SRKLFWLVDG HALRRASLCV FLMPWAHKRR LDLRQFADPA EAEGGEVPEI 
CLLSTGSRSL RDEGVRRSLD GIASAAGDVP VILMPERMDE EDVRDALHLG VRGLLPTSIE
PRVAIAALDL VLAGGCYFPV EVPAGQPFPL PSPGPATGLR EAPLAAEGLD MPLTDRQNEV
LRSLGAGASN KEIARQLSIS EATVKIHVRH LMRKYGVSNR TQVAILAMRK TAEVADLRSP
RRA