| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1120 |
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| Symbol | |
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| ID | 8018762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 1180129 |
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| End bp | 1180788 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829901 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002981084 |
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| Protein GI | 241662724 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0994252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.118956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTG TTTTGATCGA AGCCCATCCG TTGGTGCGTA CAGGCATTGC GCACCTGCTA
CGGACGCTCA AAGGCGTCAC TGTCGTCGAG CCAGACGAAG GGATGTTTGA CGCCATCGAA
ACCAATGCCG ACGCGGGTCT TCTTGTCATC GGCCTGCCGC TGCCACATCT CGATGAGTTG
TCGGCCATCG GCGAGATCAT GCACCGGCCG CACGCGCGCC ACGTGGTTGT GCTGGCTGAA
TCCGAATCGC CCGACATCAT CCGTACGCTC ATGCAGATGG GCTTGTCCGG GTACACGCTC
AAGCATTCGC CGGGCGAAGT CATCGCGGCT TCGCTGGAAC TTGTGCTGGT GGGTGGCCAA
TACATTCCGG CCAGCGCACT GCTGCCGGAA TCGCGCCTGG ACGGTGCGCC CAACCCTGCG
CTCGCTGGCG ACCCTCAGAC CGATCCGAAG CTGCTCGGTA TTACGCCCCG GCAGTACGAG
ATTCTGGTGC TGCTCTCGCG CGGGCATCCG GTCAAGACGA TCAGCCGCAT GCTGAATATC
TCCGAGGCAA CGGCCAAGGC GCATATCAGC ACGCTGTATC GGCGCCTGAA GGTCCGCAGC
CGCACTGAGG CGGTGTACGT CGCCAATCAG CGCGGCGCGC GCCTGCTCTC GGTCGCCTGA
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| Protein sequence | MNTVLIEAHP LVRTGIAHLL RTLKGVTVVE PDEGMFDAIE TNADAGLLVI GLPLPHLDEL
SAIGEIMHRP HARHVVVLAE SESPDIIRTL MQMGLSGYTL KHSPGEVIAA SLELVLVGGQ
YIPASALLPE SRLDGAPNPA LAGDPQTDPK LLGITPRQYE ILVLLSRGHP VKTISRMLNI
SEATAKAHIS TLYRRLKVRS RTEAVYVANQ RGARLLSVA
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