| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2130 |
|---|
| Symbol | |
|---|
| ID | 6282998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 2406435 |
|---|
| End bp | 2407154 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642621689 |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_001895755 |
|---|
| Protein GI | 187924113 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTAT TGCTCGTCGA CGATCACGAA CTCTTCAGAG CCGGTCTCGC ACTGCTAATC
AAAGAGCTTT TCCCGGATGT CGAACTGTTG CATGCGAATA CGTTGTCGCT CGGCGTCAAT
CTCGCGATCA CCGAGCGTCC GGACATCGTT TTTCTGGATC TTGAACTCCC CGACGGCCAC
GGTAGCGACG CGCTGATCCA GTTAAAAGAC GCACGCCCTT CCTTGCCCGT GGTCGTGGTA
TCGGCCGACG AAAGTGTGGA GTCTGTCGGC CGATGCCTCG AATTACGCGC CATGGGCTAC
GTGCCGAAAT CGTCTTCGCC CGAGGCGCTG CATGCCGCGA TCGTTGCGGT ACTCTCGGGC
GGTGTATTCC TGCCCGCGGC GAGCATTGTC GGGCTGAAAC GCGCCGCAGG CACAGACGAG
ACACAGGCAT GCCAATCAGA CAAAGCGCAA CCGAACGATC GCGTCGAACC TTGGAATGCT
CCGGGACTCG GACTCACGCC CCGCGAGTTC GAAACGCTCG CGTGGCTCGT GCGCGGTCTG
CCTTCCAAAG CCATCGCGTC GAAGATGGGA CTCGAAGATA TTACGGTGCG TAAATACATC
AGTCATCTGC TCGCGCATTT CAACCTGCGG CGCCGCACGG AACTCATCGT GATGCTGGCG
GAGAAAGGCA TTACGCTCGG GACGCTTTCA GTGCCTCATG GTTCGCGAGA GCGGGATTGA
|
|---|
| Protein sequence | MRVLLVDDHE LFRAGLALLI KELFPDVELL HANTLSLGVN LAITERPDIV FLDLELPDGH
GSDALIQLKD ARPSLPVVVV SADESVESVG RCLELRAMGY VPKSSSPEAL HAAIVAVLSG
GVFLPAASIV GLKRAAGTDE TQACQSDKAQ PNDRVEPWNA PGLGLTPREF ETLAWLVRGL
PSKAIASKMG LEDITVRKYI SHLLAHFNLR RRTELIVMLA EKGITLGTLS VPHGSRERD
|
|---|
| |