| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_4428 |
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| Symbol | |
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| ID | 5541941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 5696451 |
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| End bp | 5697146 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640896526 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001434462 |
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| Protein GI | 156744333 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTTCAA CCTCGATTGT GCTGGTCAAC GCACACGCAC TATTTCGTGA AGGGTTGCGC
CATCACCTGG CGAATTCAAC CGAGTTTCAC GTGATCGGTG AAGCAAGCAA TGGTCAACAG
GCGATTCAGG TGGTCGATCT GCTCGACCCC GATATGGTCG TGATGGAGGT GGACCTGCCG
GGTGTCAATG GTCTCGAGGT CGCGCGTGCC ATCAAACGCT CGCATCCCCA TATTCGCATC
GTCCTGCTCA GTTCGACGAT GGATGGTCAG GAGGTGGTCA AAGCCATCCG CGCCGGCATT
GCTGCCTGCG TACCGCGCAA CATCGCTCCT GAAAAACTGA TGCAGACGCT GCATCAGGTG
CGGCGCGGCA ATTATCCGAT CAACGATCTG GTGCTCTCCT CGCCTGACGT TGCGGCGCAG
GTGCTCAACG CCTTTCGTCA AATGGCGGCG GAAGAGGATA CGCAGAGCAT CTACTCGCCG
CTCTCGCCGC GTGAGTTGCA GGTGCTCGAA CTCGTCGCCG CCGGGCGCAC CAACAAAGAA
ATTGCGAAGG TGCTCGACAT TTCCAACCAG ACGGTCAAAA ACCATATCTC GTCGATCCTG
CGCAAACTGG CGGTCAATGA TCGCACGCAG GCGGTCGTTT ATGCGATGCG CCGCGGATGG
ATCAAAGTTG CGCTCCCTGG GGATCCGCTG ACCTAG
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| Protein sequence | MSSTSIVLVN AHALFREGLR HHLANSTEFH VIGEASNGQQ AIQVVDLLDP DMVVMEVDLP
GVNGLEVARA IKRSHPHIRI VLLSSTMDGQ EVVKAIRAGI AACVPRNIAP EKLMQTLHQV
RRGNYPINDL VLSSPDVAAQ VLNAFRQMAA EEDTQSIYSP LSPRELQVLE LVAAGRTNKE
IAKVLDISNQ TVKNHISSIL RKLAVNDRTQ AVVYAMRRGW IKVALPGDPL T
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