Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_4428 |
Symbol | |
ID | 5541941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 5696451 |
End bp | 5697146 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640896526 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001434462 |
Protein GI | 156744333 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCAA CCTCGATTGT GCTGGTCAAC GCACACGCAC TATTTCGTGA AGGGTTGCGC CATCACCTGG CGAATTCAAC CGAGTTTCAC GTGATCGGTG AAGCAAGCAA TGGTCAACAG GCGATTCAGG TGGTCGATCT GCTCGACCCC GATATGGTCG TGATGGAGGT GGACCTGCCG GGTGTCAATG GTCTCGAGGT CGCGCGTGCC ATCAAACGCT CGCATCCCCA TATTCGCATC GTCCTGCTCA GTTCGACGAT GGATGGTCAG GAGGTGGTCA AAGCCATCCG CGCCGGCATT GCTGCCTGCG TACCGCGCAA CATCGCTCCT GAAAAACTGA TGCAGACGCT GCATCAGGTG CGGCGCGGCA ATTATCCGAT CAACGATCTG GTGCTCTCCT CGCCTGACGT TGCGGCGCAG GTGCTCAACG CCTTTCGTCA AATGGCGGCG GAAGAGGATA CGCAGAGCAT CTACTCGCCG CTCTCGCCGC GTGAGTTGCA GGTGCTCGAA CTCGTCGCCG CCGGGCGCAC CAACAAAGAA ATTGCGAAGG TGCTCGACAT TTCCAACCAG ACGGTCAAAA ACCATATCTC GTCGATCCTG CGCAAACTGG CGGTCAATGA TCGCACGCAG GCGGTCGTTT ATGCGATGCG CCGCGGATGG ATCAAAGTTG CGCTCCCTGG GGATCCGCTG ACCTAG
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Protein sequence | MSSTSIVLVN AHALFREGLR HHLANSTEFH VIGEASNGQQ AIQVVDLLDP DMVVMEVDLP GVNGLEVARA IKRSHPHIRI VLLSSTMDGQ EVVKAIRAGI AACVPRNIAP EKLMQTLHQV RRGNYPINDL VLSSPDVAAQ VLNAFRQMAA EEDTQSIYSP LSPRELQVLE LVAAGRTNKE IAKVLDISNQ TVKNHISSIL RKLAVNDRTQ AVVYAMRRGW IKVALPGDPL T
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