Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0555 |
Symbol | |
ID | 4673951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 582184 |
End bp | 582882 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639837684 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_984881 |
Protein GI | 121592985 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.173401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.808062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGTAA TATCGCGCCT CGTGAAGATC CTCATCGTTG ACGACCATGG CCTTGTCCGG GAGGGCCTGC AAGCCATCCT CAGCCGCTCC GAGCTGCTCG CCGAGTGCGT GCAGGCGTGG GACGCCGCGT CGCTGTGGCA GCAGCTGGAG CAGCATGCCG ACATCGACCT CGTGCTGATG GACATCCAGC TGCCCGATGT CAGCGGCCTG AGCCTGCTCG AAGAGCTCAC GCAGCGGTTG CCGCAGCTGC CGGTGATCAT GCTCTCCGCA GACCACGACG CCGGCATCGT CCTCCATTCG CTGGAGCAGG GCGCACGTGG GTTCCTGCCC AAGTCGTCGC TGAACCAGGT GCTGGTATCG GCCATTCGGC TCGTGGCCGC GGGGGGCGTC TACGTGCCGC CCGAGGCGCT GCAAAAGCCG GCCGCCCGCC CCGCCGCGGC CGGGCCCCAG GCCCCGGTCT CCATTGCGTC CCTGGGGTTC ACCGCGCGGC AGACCGACGT GTTCCGGCTG CTGCTGCAAG GCCTGTCCAA CAAGCAGATC TGCCGCGAAC TCGACCTGGC GGAGCCCACC GTCAAGATCC ATGTGCGCGG CATCCTGCGC ACCCTGGGCG TGAGCAGCCG CGCCGAGGTG ATCGCCAAAT ACGGCATGTT GAGCCCGTCT CCCTCCACGC CTCGGCAGGC CGCTGCCGCG GACCACTGA
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Protein sequence | MPVISRLVKI LIVDDHGLVR EGLQAILSRS ELLAECVQAW DAASLWQQLE QHADIDLVLM DIQLPDVSGL SLLEELTQRL PQLPVIMLSA DHDAGIVLHS LEQGARGFLP KSSLNQVLVS AIRLVAAGGV YVPPEALQKP AARPAAAGPQ APVSIASLGF TARQTDVFRL LLQGLSNKQI CRELDLAEPT VKIHVRGILR TLGVSSRAEV IAKYGMLSPS PSTPRQAAAA DH
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