| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1285 |
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| Symbol | |
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| ID | 5371497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 1529566 |
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| End bp | 1530216 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640829483 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001365498 |
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| Protein GI | 152999817 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000337392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATGC AAAACAACAT CATCAGTGTC GGCTTAGTAG AAGATCAACA ATTGGTTCGC
CAAGGGATCG CTAGCCTGCT CGCTATTTCC GACAACATTC GCGTGGTGTG GCAAGCCGAA
GACGGCCAAG ATGCACTCAG CCAACTCGCC AATAATCCTG TCGATGTGCT ACTCAGTGAT
ATTCGCATGC CAAATCTTGA TGGCATCGCC ATGCTCAAAC AGATACGTCA GAGTGCCAAT
CGCTTACCTG TCATCATGTT AACCACCTTC GACGACAGTG AGTTATTCCT CAATAGTTTG
CAGGCGGGAG CCAACGGCTT TTTACTCAAG GACGTGTCAC TCGATAAGTT ACTGCACGCC
ATCGAAACCG TCGCCAAAGG CGGCTACTTG ATAGAGCCTT CGGTACTCAA ACAGATGAGT
GAGCCTAAAC CTGCACCTAG CGTTGGGGTA ACTAGAAATG AATTATTGTC GGAACGGGAG
CGGGAAATCC TCAGTTTTAT GGCAGGCGGA TTCTCCAATA AGGAGATCGC CAATGCGGTA
TTTTTAGCCG AGGGCACAGT GAAAAATCAT GTCTCTAACA TACTCACTAA ACTCGATTGC
CGAGACCGCA CCCAAGCGGT ACTCAAAGGC TTACAACTAG CGTTGATTTA A
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| Protein sequence | MDMQNNIISV GLVEDQQLVR QGIASLLAIS DNIRVVWQAE DGQDALSQLA NNPVDVLLSD
IRMPNLDGIA MLKQIRQSAN RLPVIMLTTF DDSELFLNSL QAGANGFLLK DVSLDKLLHA
IETVAKGGYL IEPSVLKQMS EPKPAPSVGV TRNELLSERE REILSFMAGG FSNKEIANAV
FLAEGTVKNH VSNILTKLDC RDRTQAVLKG LQLALI
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