Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3579 |
Symbol | |
ID | 5833011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 3961448 |
End bp | 3962089 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641369371 |
Product | regulatory protein LuxR |
Protein accession | YP_001641028 |
Protein GI | 163852985 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0227422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGGA TCATCATTGC AGATGACGAC ACATTTTTCC GCACCAATTT GCGGCGCATC CTTGAGGAGC GTCTAAAGGG AAGTTCCGTC TCAGGAGTTT CAAATTCTTC TGGGCTTATT AAAAGGTTGC TGTATCCCCC AAGGACAGAT CTTGCGATTG TCGGATCATG TCTTCTTCCG GCAGATGACC CAACTTACTT AGGGGCGCTG AAACGAGCGG CCGGGGCCGC GCGGCTTATG CTTGTCGTGT CGCAAGCCTC AGCCGACCTA TTTCAGGACG CGTTGAGCTT AGGCTTCCAC GGTCTGGTCG TGCGCCGTCA GAGCCAAGAG GAAGTACTGG TGGCGGTCAG GACGATACTC GAGGGCCGTC TCTACGCGCC CAGTGCCATC TTGTCGGGCA GCTCGTCCGA CTCAACTCTA CCGGTGCGCC GGCCGGAGCT CGGAGAGCGC CCATTCGGTT TGACCGTGCG TCAACTTGAA GTTCTGTCAC TGATTGGCAA AGGTTTGTCC AATCGAGAAA TTGCTGATGT GCTGCGGATC GCCGAGGCAA CGGTCAAAAT CCATGTCTCA GCCGTGTTCC GAGCGCTCGG CGTCAGAAAT CGAACTGAAG CTGCTCTGAT ACTTCCTACA ATGACTAGAT AA
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Protein sequence | MPRIIIADDD TFFRTNLRRI LEERLKGSSV SGVSNSSGLI KRLLYPPRTD LAIVGSCLLP ADDPTYLGAL KRAAGAARLM LVVSQASADL FQDALSLGFH GLVVRRQSQE EVLVAVRTIL EGRLYAPSAI LSGSSSDSTL PVRRPELGER PFGLTVRQLE VLSLIGKGLS NREIADVLRI AEATVKIHVS AVFRALGVRN RTEAALILPT MTR
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