Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1518.1 |
Symbol | |
ID | 3086707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | - |
Start bp | 1648675 |
End bp | 1649346 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637565404 |
Product | DNA-binding response regulator |
Protein accession | YP_106110 |
Protein GI | 53717636 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000399536 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGTAG AGAGAAAGTG TGAAAGGGTG CTCGTCGTCG ACAGCCATCC GATCGTGCGC GACGGCATCG AGGTCGTGCT CGGCAAGGCG TATGCGGGAA TCGACGTGGA CGGCGCGGCC GACATGGCCG AGGCGAGCGA CCGGTGCGGT CGCGATCGTC CGGATCTCGT GCTGTTGGAC GTGATGCTGC CGGGCGAGGA TCCGCTGCCG GCGATGGGCG AGATCCTGCG CGCGCACCCG GGCCTGCGGT TCGTCGTCTT CACCGCGCTC GGCTCGGAGG CGCGCGCGGC GGACGCGATC CGCTTCGGCG CCTCCGGCTA TCTGCTGAAG TGGTGCAGCC CGGACGGCAT CGTGCAGGCG ATTCGCCGCG TGATGGCGGG GCGCGTTCAC ATCGATCCGT CGCTCGACGA GGCGAGGGTG GCGTCGGCGG CCGGCGGCCG CACGCTCGCC TCGCCCGTCG ACGAGCTCAC GCGGCGCGAG AAGCAGGTGC TCAAGCTGAT CGCCGACGGG ATGCGCAATC GCGAAATCGC GTCGCTGCTG AACATCAGCC CGAAGACGGT CGATTGTCAT CGGCAGCGGC TGATGCAGAA GCTCGGCGCG CGCAACGTCG CGACCGTGAT CCACTGGGCG TATCGATACG GATATGCGAA CGCGTGCGCG CCGGCGATGT AG
|
Protein sequence | MVVERKCERV LVVDSHPIVR DGIEVVLGKA YAGIDVDGAA DMAEASDRCG RDRPDLVLLD VMLPGEDPLP AMGEILRAHP GLRFVVFTAL GSEARAADAI RFGASGYLLK WCSPDGIVQA IRRVMAGRVH IDPSLDEARV ASAAGGRTLA SPVDELTRRE KQVLKLIADG MRNREIASLL NISPKTVDCH RQRLMQKLGA RNVATVIHWA YRYGYANACA PAM
|
| |